Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
CHKB-CPT1BH3BT56 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
CHKB-CPT1BH3BT56 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CHKB-CPT1BH3BT56 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CHKB-CPT1BH3BT56 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CHKB-CPT1BH3BT56 AC006449.6-201ENST00000612330 2296 ntBASIC9.11□□□□□ -0.95
CHKB-CPT1BH3BT56 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CHKB-CPT1BH3BT56 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC9.11□□□□□ -0.95
CHKB-CPT1BH3BT56 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CHKB-CPT1BH3BT56 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CHKB-CPT1BH3BT56 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
CHKB-CPT1BH3BT56 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
CHKB-CPT1BH3BT56 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CHKB-CPT1BH3BT56 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CHKB-CPT1BH3BT56 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
CHKB-CPT1BH3BT56 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC9.11□□□□□ -0.95
CHKB-CPT1BH3BT56 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 PLXNA4-202ENST00000359827 13786 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 NME4-202ENST00000382940 766 ntTSL 3 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 KRT18P41-201ENST00000518924 1277 ntBASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 CYP2T3P-201ENST00000601990 817 ntBASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 RAP2CP1-201ENST00000605103 478 ntBASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 NME4-211ENST00000620944 1193 ntTSL 2 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 PTGER3-206ENST00000370924 6982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 KRT8P3-201ENST00000519669 1449 ntBASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 UROS-202ENST00000368778 1556 ntTSL 2 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 KCND2-201ENST00000331113 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 CAMSAP2-202ENST00000358823 7352 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
CHKB-CPT1BH3BT56 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms