Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
HS3ST4Q9Y661 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
HS3ST4Q9Y661 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.58■■□□□ 1.53
HS3ST4Q9Y661 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.58■■□□□ 1.53
HS3ST4Q9Y661 AC019171.1-201ENST00000601251 1056 ntBASIC24.58■■□□□ 1.53
HS3ST4Q9Y661 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
HS3ST4Q9Y661 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HS3ST4Q9Y661 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
HS3ST4Q9Y661 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.57■■□□□ 1.52
HS3ST4Q9Y661 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
HS3ST4Q9Y661 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HS3ST4Q9Y661 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
HS3ST4Q9Y661 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
HS3ST4Q9Y661 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.55■■□□□ 1.52
HS3ST4Q9Y661 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
HS3ST4Q9Y661 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HS3ST4Q9Y661 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HS3ST4Q9Y661 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.55■■□□□ 1.52
HS3ST4Q9Y661 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HS3ST4Q9Y661 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HS3ST4Q9Y661 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
HS3ST4Q9Y661 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HS3ST4Q9Y661 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.54■■□□□ 1.52
HS3ST4Q9Y661 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
HS3ST4Q9Y661 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
HS3ST4Q9Y661 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HS3ST4Q9Y661 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
HS3ST4Q9Y661 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
HS3ST4Q9Y661 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
HS3ST4Q9Y661 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HS3ST4Q9Y661 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.53■■□□□ 1.52
HS3ST4Q9Y661 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
HS3ST4Q9Y661 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HS3ST4Q9Y661 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.53■■□□□ 1.52
HS3ST4Q9Y661 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HS3ST4Q9Y661 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.53■■□□□ 1.52
HS3ST4Q9Y661 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HS3ST4Q9Y661 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
HS3ST4Q9Y661 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
HS3ST4Q9Y661 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
HS3ST4Q9Y661 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
HS3ST4Q9Y661 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
HS3ST4Q9Y661 AC103834.1-201ENST00000520383 144 ntBASIC24.52■■□□□ 1.52
HS3ST4Q9Y661 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
HS3ST4Q9Y661 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
HS3ST4Q9Y661 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
HS3ST4Q9Y661 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
HS3ST4Q9Y661 KRT8P33-201ENST00000508125 1423 ntBASIC24.52■■□□□ 1.52
HS3ST4Q9Y661 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
HS3ST4Q9Y661 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
HS3ST4Q9Y661 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.51■■□□□ 1.51
HS3ST4Q9Y661 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
HS3ST4Q9Y661 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
HS3ST4Q9Y661 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.5■■□□□ 1.51
HS3ST4Q9Y661 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.5■■□□□ 1.51
HS3ST4Q9Y661 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
HS3ST4Q9Y661 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
HS3ST4Q9Y661 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
HS3ST4Q9Y661 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
HS3ST4Q9Y661 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
HS3ST4Q9Y661 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
HS3ST4Q9Y661 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
HS3ST4Q9Y661 RARRES2P1-201ENST00000474487 481 ntBASIC24.49■■□□□ 1.51
HS3ST4Q9Y661 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.49■■□□□ 1.51
HS3ST4Q9Y661 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.49■■□□□ 1.51
HS3ST4Q9Y661 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
HS3ST4Q9Y661 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
HS3ST4Q9Y661 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
HS3ST4Q9Y661 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
HS3ST4Q9Y661 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
HS3ST4Q9Y661 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
HS3ST4Q9Y661 MIR4508-201ENST00000584178 70 ntBASIC24.48■■□□□ 1.51
HS3ST4Q9Y661 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.47■■□□□ 1.51
HS3ST4Q9Y661 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HS3ST4Q9Y661 FOXO3B-201ENST00000395675 1928 ntBASIC24.47■■□□□ 1.51
HS3ST4Q9Y661 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.47■■□□□ 1.51
HS3ST4Q9Y661 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.47■■□□□ 1.51
HS3ST4Q9Y661 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
HS3ST4Q9Y661 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.47■■□□□ 1.51
HS3ST4Q9Y661 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HS3ST4Q9Y661 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.47■■□□□ 1.51
HS3ST4Q9Y661 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
HS3ST4Q9Y661 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
HS3ST4Q9Y661 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.46■■□□□ 1.51
HS3ST4Q9Y661 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.46■■□□□ 1.51
HS3ST4Q9Y661 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
HS3ST4Q9Y661 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.46■■□□□ 1.51
HS3ST4Q9Y661 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HS3ST4Q9Y661 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.45■■□□□ 1.51
HS3ST4Q9Y661 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
HS3ST4Q9Y661 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
HS3ST4Q9Y661 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
HS3ST4Q9Y661 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
HS3ST4Q9Y661 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HS3ST4Q9Y661 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.44■■□□□ 1.5
HS3ST4Q9Y661 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
HS3ST4Q9Y661 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
HS3ST4Q9Y661 AL592295.1-201ENST00000400984 884 ntBASIC24.44■■□□□ 1.5
HS3ST4Q9Y661 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HS3ST4Q9Y661 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms