Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
HCFC2Q9Y5Z7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
HCFC2Q9Y5Z7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.2■■□□□ 1.62
HCFC2Q9Y5Z7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.2■■□□□ 1.62
HCFC2Q9Y5Z7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
HCFC2Q9Y5Z7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
HCFC2Q9Y5Z7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HCFC2Q9Y5Z7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
HCFC2Q9Y5Z7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.19■■□□□ 1.62
HCFC2Q9Y5Z7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.19■■□□□ 1.62
HCFC2Q9Y5Z7 MTDHP2-201ENST00000601468 714 ntBASIC25.19■■□□□ 1.62
HCFC2Q9Y5Z7 MIR6724-1-201ENST00000616420 92 ntBASIC25.19■■□□□ 1.62
HCFC2Q9Y5Z7 MIR6724-2-201ENST00000616483 92 ntBASIC25.19■■□□□ 1.62
HCFC2Q9Y5Z7 MIR6724-4-201ENST00000617390 92 ntBASIC25.19■■□□□ 1.62
HCFC2Q9Y5Z7 MIR6724-3-201ENST00000622482 92 ntBASIC25.19■■□□□ 1.62
HCFC2Q9Y5Z7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.19■■□□□ 1.62
HCFC2Q9Y5Z7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.19■■□□□ 1.62
HCFC2Q9Y5Z7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.19■■□□□ 1.62
HCFC2Q9Y5Z7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
HCFC2Q9Y5Z7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HCFC2Q9Y5Z7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
HCFC2Q9Y5Z7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.18■■□□□ 1.62
HCFC2Q9Y5Z7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
HCFC2Q9Y5Z7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.18■■□□□ 1.62
HCFC2Q9Y5Z7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HCFC2Q9Y5Z7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
HCFC2Q9Y5Z7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.18■■□□□ 1.62
HCFC2Q9Y5Z7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
HCFC2Q9Y5Z7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.17■■□□□ 1.62
HCFC2Q9Y5Z7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.17■■□□□ 1.62
HCFC2Q9Y5Z7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.17■■□□□ 1.62
HCFC2Q9Y5Z7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
HCFC2Q9Y5Z7 AC110285.6-201ENST00000617652 491 ntBASIC25.17■■□□□ 1.62
HCFC2Q9Y5Z7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
HCFC2Q9Y5Z7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
HCFC2Q9Y5Z7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
HCFC2Q9Y5Z7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
HCFC2Q9Y5Z7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.16■■□□□ 1.62
HCFC2Q9Y5Z7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
HCFC2Q9Y5Z7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
HCFC2Q9Y5Z7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
HCFC2Q9Y5Z7 AP004609.3-201ENST00000610705 1884 ntBASIC25.15■■□□□ 1.62
HCFC2Q9Y5Z7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.15■■□□□ 1.62
HCFC2Q9Y5Z7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.15■■□□□ 1.62
HCFC2Q9Y5Z7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
HCFC2Q9Y5Z7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.15■■□□□ 1.62
HCFC2Q9Y5Z7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
HCFC2Q9Y5Z7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.15■■□□□ 1.62
HCFC2Q9Y5Z7 AC011551.1-201ENST00000614101 683 ntBASIC25.15■■□□□ 1.62
HCFC2Q9Y5Z7 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.15■■□□□ 1.62
HCFC2Q9Y5Z7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
HCFC2Q9Y5Z7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
HCFC2Q9Y5Z7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
HCFC2Q9Y5Z7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.14■■□□□ 1.62
HCFC2Q9Y5Z7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.14■■□□□ 1.62
HCFC2Q9Y5Z7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
HCFC2Q9Y5Z7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.14■■□□□ 1.61
HCFC2Q9Y5Z7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
HCFC2Q9Y5Z7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
HCFC2Q9Y5Z7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
HCFC2Q9Y5Z7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
HCFC2Q9Y5Z7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HCFC2Q9Y5Z7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.13■■□□□ 1.61
HCFC2Q9Y5Z7 AL356740.2-201ENST00000601559 647 ntBASIC25.13■■□□□ 1.61
HCFC2Q9Y5Z7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.13■■□□□ 1.61
HCFC2Q9Y5Z7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
HCFC2Q9Y5Z7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.12■■□□□ 1.61
HCFC2Q9Y5Z7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.12■■□□□ 1.61
HCFC2Q9Y5Z7 MIR4466-201ENST00000606121 54 ntBASIC25.12■■□□□ 1.61
HCFC2Q9Y5Z7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.12■■□□□ 1.61
HCFC2Q9Y5Z7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
HCFC2Q9Y5Z7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
HCFC2Q9Y5Z7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HCFC2Q9Y5Z7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.11■■□□□ 1.61
HCFC2Q9Y5Z7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.11■■□□□ 1.61
HCFC2Q9Y5Z7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
HCFC2Q9Y5Z7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HCFC2Q9Y5Z7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
HCFC2Q9Y5Z7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.11■■□□□ 1.61
HCFC2Q9Y5Z7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
HCFC2Q9Y5Z7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
HCFC2Q9Y5Z7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
HCFC2Q9Y5Z7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HCFC2Q9Y5Z7 AC096631.2-201ENST00000436136 790 ntBASIC25.1■■□□□ 1.61
HCFC2Q9Y5Z7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
HCFC2Q9Y5Z7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
HCFC2Q9Y5Z7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.09■■□□□ 1.61
HCFC2Q9Y5Z7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
HCFC2Q9Y5Z7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
HCFC2Q9Y5Z7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.08■■□□□ 1.61
HCFC2Q9Y5Z7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.08■■□□□ 1.61
HCFC2Q9Y5Z7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.08■■□□□ 1.61
HCFC2Q9Y5Z7 AC005837.3-201ENST00000612163 286 ntBASIC25.08■■□□□ 1.61
HCFC2Q9Y5Z7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
HCFC2Q9Y5Z7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
HCFC2Q9Y5Z7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
HCFC2Q9Y5Z7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.07■■□□□ 1.6
HCFC2Q9Y5Z7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
HCFC2Q9Y5Z7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
HCFC2Q9Y5Z7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms