Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.28■■□□□ 1.16
PCDHGB6Q9Y5F9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB6Q9Y5F9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHGB6Q9Y5F9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHGB6Q9Y5F9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGB6Q9Y5F9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHGB6Q9Y5F9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.15
PCDHGB6Q9Y5F9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB6Q9Y5F9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
PCDHGB6Q9Y5F9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB6Q9Y5F9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB6Q9Y5F9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB6Q9Y5F9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB6Q9Y5F9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB6Q9Y5F9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB6Q9Y5F9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB6Q9Y5F9 AC019171.1-201ENST00000601251 1056 ntBASIC22.26■■□□□ 1.15
PCDHGB6Q9Y5F9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB6Q9Y5F9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHGB6Q9Y5F9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB6Q9Y5F9 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
PCDHGB6Q9Y5F9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
PCDHGB6Q9Y5F9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB6Q9Y5F9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDHGB6Q9Y5F9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB6Q9Y5F9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PCDHGB6Q9Y5F9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB6Q9Y5F9 MIR4508-201ENST00000584178 70 ntBASIC22.25■■□□□ 1.15
PCDHGB6Q9Y5F9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDHGB6Q9Y5F9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB6Q9Y5F9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGB6Q9Y5F9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGB6Q9Y5F9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGB6Q9Y5F9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGB6Q9Y5F9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGB6Q9Y5F9 KRT18P10-201ENST00000388836 1287 ntBASIC22.24■■□□□ 1.15
PCDHGB6Q9Y5F9 YBX1P4-201ENST00000392794 808 ntBASIC22.24■■□□□ 1.15
PCDHGB6Q9Y5F9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.24■■□□□ 1.15
PCDHGB6Q9Y5F9 AL035685.1-201ENST00000636663 812 ntBASIC22.24■■□□□ 1.15
PCDHGB6Q9Y5F9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGB6Q9Y5F9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGB6Q9Y5F9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGB6Q9Y5F9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGB6Q9Y5F9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.23■■□□□ 1.15
PCDHGB6Q9Y5F9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGB6Q9Y5F9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGB6Q9Y5F9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGB6Q9Y5F9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHGB6Q9Y5F9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHGB6Q9Y5F9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGB6Q9Y5F9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGB6Q9Y5F9 AL451085.2-201ENST00000605085 799 ntBASIC22.22■■□□□ 1.15
PCDHGB6Q9Y5F9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDHGB6Q9Y5F9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGB6Q9Y5F9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGB6Q9Y5F9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
PCDHGB6Q9Y5F9 AC103834.1-201ENST00000520383 144 ntBASIC22.21■■□□□ 1.15
PCDHGB6Q9Y5F9 AC087393.1-201ENST00000582896 145 ntBASIC22.21■■□□□ 1.15
PCDHGB6Q9Y5F9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGB6Q9Y5F9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGB6Q9Y5F9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGB6Q9Y5F9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGB6Q9Y5F9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGB6Q9Y5F9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHGB6Q9Y5F9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGB6Q9Y5F9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHGB6Q9Y5F9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.2■■□□□ 1.14
PCDHGB6Q9Y5F9 PVT1_1.1-201ENST00000615125 194 ntBASIC22.2■■□□□ 1.14
PCDHGB6Q9Y5F9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGB6Q9Y5F9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.2■■□□□ 1.14
PCDHGB6Q9Y5F9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGB6Q9Y5F9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
PCDHGB6Q9Y5F9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB6Q9Y5F9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PCDHGB6Q9Y5F9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB6Q9Y5F9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB6Q9Y5F9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB6Q9Y5F9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB6Q9Y5F9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB6Q9Y5F9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHGB6Q9Y5F9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHGB6Q9Y5F9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDHGB6Q9Y5F9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHGB6Q9Y5F9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.18■■□□□ 1.14
PCDHGB6Q9Y5F9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGB6Q9Y5F9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGB6Q9Y5F9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHGB6Q9Y5F9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGB6Q9Y5F9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHGB6Q9Y5F9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGB6Q9Y5F9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGB6Q9Y5F9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGB6Q9Y5F9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PCDHGB6Q9Y5F9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGB6Q9Y5F9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGB6Q9Y5F9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGB6Q9Y5F9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGB6Q9Y5F9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGB6Q9Y5F9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGB6Q9Y5F9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms