Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
KDM3AQ9Y4C1 MIR4508-201ENST00000584178 70 ntBASIC26.83■■□□□ 1.89
KDM3AQ9Y4C1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
KDM3AQ9Y4C1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.88
KDM3AQ9Y4C1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.82■■□□□ 1.88
KDM3AQ9Y4C1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
KDM3AQ9Y4C1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.82■■□□□ 1.88
KDM3AQ9Y4C1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
KDM3AQ9Y4C1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
KDM3AQ9Y4C1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
KDM3AQ9Y4C1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
KDM3AQ9Y4C1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
KDM3AQ9Y4C1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
KDM3AQ9Y4C1 AC097639.1-201ENST00000565519 1891 ntBASIC26.81■■□□□ 1.88
KDM3AQ9Y4C1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
KDM3AQ9Y4C1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
KDM3AQ9Y4C1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.8■■□□□ 1.88
KDM3AQ9Y4C1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.8■■□□□ 1.88
KDM3AQ9Y4C1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.8■■□□□ 1.88
KDM3AQ9Y4C1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.8■■□□□ 1.88
KDM3AQ9Y4C1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.79■■□□□ 1.88
KDM3AQ9Y4C1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
KDM3AQ9Y4C1 KRT8P33-201ENST00000508125 1423 ntBASIC26.79■■□□□ 1.88
KDM3AQ9Y4C1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.79■■□□□ 1.88
KDM3AQ9Y4C1 AC019171.1-201ENST00000601251 1056 ntBASIC26.79■■□□□ 1.88
KDM3AQ9Y4C1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
KDM3AQ9Y4C1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
KDM3AQ9Y4C1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.78■■□□□ 1.88
KDM3AQ9Y4C1 YBX1P4-201ENST00000392794 808 ntBASIC26.78■■□□□ 1.88
KDM3AQ9Y4C1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
KDM3AQ9Y4C1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
KDM3AQ9Y4C1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
KDM3AQ9Y4C1 AC087393.1-201ENST00000582896 145 ntBASIC26.77■■□□□ 1.88
KDM3AQ9Y4C1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
KDM3AQ9Y4C1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
KDM3AQ9Y4C1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
KDM3AQ9Y4C1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.76■■□□□ 1.87
KDM3AQ9Y4C1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.76■■□□□ 1.87
KDM3AQ9Y4C1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
KDM3AQ9Y4C1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
KDM3AQ9Y4C1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
KDM3AQ9Y4C1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
KDM3AQ9Y4C1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
KDM3AQ9Y4C1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
KDM3AQ9Y4C1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
KDM3AQ9Y4C1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
KDM3AQ9Y4C1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.75■■□□□ 1.87
KDM3AQ9Y4C1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.74■■□□□ 1.87
KDM3AQ9Y4C1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
KDM3AQ9Y4C1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.74■■□□□ 1.87
KDM3AQ9Y4C1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
KDM3AQ9Y4C1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.74■■□□□ 1.87
KDM3AQ9Y4C1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
KDM3AQ9Y4C1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
KDM3AQ9Y4C1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
KDM3AQ9Y4C1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
KDM3AQ9Y4C1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
KDM3AQ9Y4C1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
KDM3AQ9Y4C1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.73■■□□□ 1.87
KDM3AQ9Y4C1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
KDM3AQ9Y4C1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
KDM3AQ9Y4C1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
KDM3AQ9Y4C1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
KDM3AQ9Y4C1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
KDM3AQ9Y4C1 AC009299.2-201ENST00000482477 511 ntBASIC26.72■■□□□ 1.87
KDM3AQ9Y4C1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
KDM3AQ9Y4C1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
KDM3AQ9Y4C1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
KDM3AQ9Y4C1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
KDM3AQ9Y4C1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
KDM3AQ9Y4C1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
KDM3AQ9Y4C1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
KDM3AQ9Y4C1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
KDM3AQ9Y4C1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.71■■□□□ 1.87
KDM3AQ9Y4C1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
KDM3AQ9Y4C1 RPS2P7-201ENST00000447334 885 ntBASIC26.71■■□□□ 1.87
KDM3AQ9Y4C1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.71■■□□□ 1.87
KDM3AQ9Y4C1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.71■■□□□ 1.87
KDM3AQ9Y4C1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
KDM3AQ9Y4C1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
KDM3AQ9Y4C1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
KDM3AQ9Y4C1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
KDM3AQ9Y4C1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
KDM3AQ9Y4C1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
KDM3AQ9Y4C1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
KDM3AQ9Y4C1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
KDM3AQ9Y4C1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
KDM3AQ9Y4C1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
KDM3AQ9Y4C1 AC020928.2-201ENST00000588717 2197 ntBASIC26.68■■□□□ 1.86
KDM3AQ9Y4C1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
KDM3AQ9Y4C1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
KDM3AQ9Y4C1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
KDM3AQ9Y4C1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.67■■□□□ 1.86
KDM3AQ9Y4C1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
KDM3AQ9Y4C1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
KDM3AQ9Y4C1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
KDM3AQ9Y4C1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
KDM3AQ9Y4C1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
KDM3AQ9Y4C1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.66■■□□□ 1.86
KDM3AQ9Y4C1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms