Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
NCKAP1Q9Y2A7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
NCKAP1Q9Y2A7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NCKAP1Q9Y2A7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NCKAP1Q9Y2A7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
NCKAP1Q9Y2A7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.85■■□□□ 1.41
NCKAP1Q9Y2A7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NCKAP1Q9Y2A7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NCKAP1Q9Y2A7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NCKAP1Q9Y2A7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NCKAP1Q9Y2A7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NCKAP1Q9Y2A7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.84■■□□□ 1.41
NCKAP1Q9Y2A7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.84■■□□□ 1.41
NCKAP1Q9Y2A7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NCKAP1Q9Y2A7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.83■■□□□ 1.41
NCKAP1Q9Y2A7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NCKAP1Q9Y2A7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
NCKAP1Q9Y2A7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
NCKAP1Q9Y2A7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NCKAP1Q9Y2A7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
NCKAP1Q9Y2A7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.83■■□□□ 1.41
NCKAP1Q9Y2A7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
NCKAP1Q9Y2A7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NCKAP1Q9Y2A7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NCKAP1Q9Y2A7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NCKAP1Q9Y2A7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
NCKAP1Q9Y2A7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NCKAP1Q9Y2A7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.82■■□□□ 1.4
NCKAP1Q9Y2A7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.82■■□□□ 1.4
NCKAP1Q9Y2A7 AC021242.3-201ENST00000607598 1377 ntBASIC23.81■■□□□ 1.4
NCKAP1Q9Y2A7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NCKAP1Q9Y2A7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NCKAP1Q9Y2A7 KRT16P3-201ENST00000439127 1283 ntBASIC23.81■■□□□ 1.4
NCKAP1Q9Y2A7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.81■■□□□ 1.4
NCKAP1Q9Y2A7 MIR4281-201ENST00000580852 62 ntBASIC23.81■■□□□ 1.4
NCKAP1Q9Y2A7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.8■■□□□ 1.4
NCKAP1Q9Y2A7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NCKAP1Q9Y2A7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NCKAP1Q9Y2A7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NCKAP1Q9Y2A7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NCKAP1Q9Y2A7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NCKAP1Q9Y2A7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NCKAP1Q9Y2A7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NCKAP1Q9Y2A7 AC011551.1-201ENST00000614101 683 ntBASIC23.8■■□□□ 1.4
NCKAP1Q9Y2A7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NCKAP1Q9Y2A7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.8■■□□□ 1.4
NCKAP1Q9Y2A7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NCKAP1Q9Y2A7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.79■■□□□ 1.4
NCKAP1Q9Y2A7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.79■■□□□ 1.4
NCKAP1Q9Y2A7 TSPY9P-201ENST00000440215 945 ntBASIC23.79■■□□□ 1.4
NCKAP1Q9Y2A7 TSPY11P-201ENST00000442607 1045 ntBASIC23.79■■□□□ 1.4
NCKAP1Q9Y2A7 UNC93B8-201ENST00000511903 705 ntBASIC23.79■■□□□ 1.4
NCKAP1Q9Y2A7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.79■■□□□ 1.4
NCKAP1Q9Y2A7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCKAP1Q9Y2A7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCKAP1Q9Y2A7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NCKAP1Q9Y2A7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.78■■□□□ 1.4
NCKAP1Q9Y2A7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NCKAP1Q9Y2A7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NCKAP1Q9Y2A7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
NCKAP1Q9Y2A7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.77■■□□□ 1.4
NCKAP1Q9Y2A7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCKAP1Q9Y2A7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.77■■□□□ 1.4
NCKAP1Q9Y2A7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.77■■□□□ 1.4
NCKAP1Q9Y2A7 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.77■■□□□ 1.4
NCKAP1Q9Y2A7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.76■■□□□ 1.39
NCKAP1Q9Y2A7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.76■■□□□ 1.39
NCKAP1Q9Y2A7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.76■■□□□ 1.39
NCKAP1Q9Y2A7 AC092028.1-203ENST00000608262 953 ntBASIC23.76■■□□□ 1.39
NCKAP1Q9Y2A7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.76■■□□□ 1.39
NCKAP1Q9Y2A7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.76■■□□□ 1.39
NCKAP1Q9Y2A7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCKAP1Q9Y2A7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
NCKAP1Q9Y2A7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NCKAP1Q9Y2A7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
NCKAP1Q9Y2A7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NCKAP1Q9Y2A7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.75■■□□□ 1.39
NCKAP1Q9Y2A7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.75■■□□□ 1.39
NCKAP1Q9Y2A7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
NCKAP1Q9Y2A7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NCKAP1Q9Y2A7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
NCKAP1Q9Y2A7 AC008406.3-201ENST00000620001 1374 ntBASIC23.75■■□□□ 1.39
NCKAP1Q9Y2A7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.75■■□□□ 1.39
NCKAP1Q9Y2A7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NCKAP1Q9Y2A7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
NCKAP1Q9Y2A7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.74■■□□□ 1.39
NCKAP1Q9Y2A7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.74■■□□□ 1.39
NCKAP1Q9Y2A7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NCKAP1Q9Y2A7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.74■■□□□ 1.39
NCKAP1Q9Y2A7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.74■■□□□ 1.39
NCKAP1Q9Y2A7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
NCKAP1Q9Y2A7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.74■■□□□ 1.39
NCKAP1Q9Y2A7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NCKAP1Q9Y2A7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NCKAP1Q9Y2A7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NCKAP1Q9Y2A7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
NCKAP1Q9Y2A7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.73■■□□□ 1.39
NCKAP1Q9Y2A7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
NCKAP1Q9Y2A7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NCKAP1Q9Y2A7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms