Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.86■■□□□ 1.09
NPIPA1Q9UND3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NPIPA1Q9UND3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NPIPA1Q9UND3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
NPIPA1Q9UND3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.85■■□□□ 1.09
NPIPA1Q9UND3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NPIPA1Q9UND3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.85■■□□□ 1.09
NPIPA1Q9UND3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NPIPA1Q9UND3 AC145676.1-201ENST00000514988 2004 ntBASIC21.85■■□□□ 1.09
NPIPA1Q9UND3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NPIPA1Q9UND3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NPIPA1Q9UND3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.84■■□□□ 1.09
NPIPA1Q9UND3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPIPA1Q9UND3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
NPIPA1Q9UND3 GUSBP5-201ENST00000418136 578 ntBASIC21.84■■□□□ 1.09
NPIPA1Q9UND3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
NPIPA1Q9UND3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NPIPA1Q9UND3 KRT18P10-201ENST00000388836 1287 ntBASIC21.83■■□□□ 1.09
NPIPA1Q9UND3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.83■■□□□ 1.09
NPIPA1Q9UND3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.83■■□□□ 1.09
NPIPA1Q9UND3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.83■■□□□ 1.09
NPIPA1Q9UND3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
NPIPA1Q9UND3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
NPIPA1Q9UND3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPIPA1Q9UND3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.82■■□□□ 1.08
NPIPA1Q9UND3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NPIPA1Q9UND3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NPIPA1Q9UND3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.82■■□□□ 1.08
NPIPA1Q9UND3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
NPIPA1Q9UND3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.82■■□□□ 1.08
NPIPA1Q9UND3 AC131212.1-201ENST00000613771 668 ntBASIC21.82■■□□□ 1.08
NPIPA1Q9UND3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.82■■□□□ 1.08
NPIPA1Q9UND3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NPIPA1Q9UND3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NPIPA1Q9UND3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NPIPA1Q9UND3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NPIPA1Q9UND3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
NPIPA1Q9UND3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.81■■□□□ 1.08
NPIPA1Q9UND3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.81■■□□□ 1.08
NPIPA1Q9UND3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NPIPA1Q9UND3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.8■■□□□ 1.08
NPIPA1Q9UND3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NPIPA1Q9UND3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NPIPA1Q9UND3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPIPA1Q9UND3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.8■■□□□ 1.08
NPIPA1Q9UND3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
NPIPA1Q9UND3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPIPA1Q9UND3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPIPA1Q9UND3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPIPA1Q9UND3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
NPIPA1Q9UND3 AC239859.2-201ENST00000444165 318 ntBASIC21.79■■□□□ 1.08
NPIPA1Q9UND3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.79■■□□□ 1.08
NPIPA1Q9UND3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NPIPA1Q9UND3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPIPA1Q9UND3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.79■■□□□ 1.08
NPIPA1Q9UND3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
NPIPA1Q9UND3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPIPA1Q9UND3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPIPA1Q9UND3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.78■■□□□ 1.08
NPIPA1Q9UND3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.78■■□□□ 1.08
NPIPA1Q9UND3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
NPIPA1Q9UND3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NPIPA1Q9UND3 THA1P-201ENST00000590384 1145 ntBASIC21.77■■□□□ 1.08
NPIPA1Q9UND3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NPIPA1Q9UND3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NPIPA1Q9UND3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
NPIPA1Q9UND3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NPIPA1Q9UND3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.77■■□□□ 1.07
NPIPA1Q9UND3 DUSP8P4-201ENST00000399538 1761 ntBASIC21.76■■□□□ 1.07
NPIPA1Q9UND3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.76■■□□□ 1.07
NPIPA1Q9UND3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPIPA1Q9UND3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NPIPA1Q9UND3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.76■■□□□ 1.07
NPIPA1Q9UND3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPIPA1Q9UND3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPIPA1Q9UND3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
NPIPA1Q9UND3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.74■■□□□ 1.07
NPIPA1Q9UND3 AL592295.1-201ENST00000400984 884 ntBASIC21.74■■□□□ 1.07
NPIPA1Q9UND3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.74■■□□□ 1.07
NPIPA1Q9UND3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.74■■□□□ 1.07
NPIPA1Q9UND3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPIPA1Q9UND3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
NPIPA1Q9UND3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NPIPA1Q9UND3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPIPA1Q9UND3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPIPA1Q9UND3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.73■■□□□ 1.07
NPIPA1Q9UND3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.73■■□□□ 1.07
NPIPA1Q9UND3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPIPA1Q9UND3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPIPA1Q9UND3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPIPA1Q9UND3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
NPIPA1Q9UND3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPIPA1Q9UND3 AL356441.2-201ENST00000443009 864 ntBASIC21.72■■□□□ 1.07
NPIPA1Q9UND3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.72■■□□□ 1.07
NPIPA1Q9UND3 AC022616.5-201ENST00000518796 181 ntBASIC21.72■■□□□ 1.07
NPIPA1Q9UND3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NPIPA1Q9UND3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NPIPA1Q9UND3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.72■■□□□ 1.07
NPIPA1Q9UND3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPIPA1Q9UND3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms