Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42EP3Q9UKI2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42EP3Q9UKI2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.75■□□□□ 0.75
CDC42EP3Q9UKI2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDC42EP3Q9UKI2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.75■□□□□ 0.75
CDC42EP3Q9UKI2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42EP3Q9UKI2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42EP3Q9UKI2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CDC42EP3Q9UKI2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42EP3Q9UKI2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42EP3Q9UKI2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.74■□□□□ 0.75
CDC42EP3Q9UKI2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.74■□□□□ 0.75
CDC42EP3Q9UKI2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.74■□□□□ 0.75
CDC42EP3Q9UKI2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42EP3Q9UKI2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.74■□□□□ 0.75
CDC42EP3Q9UKI2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42EP3Q9UKI2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.73■□□□□ 0.75
CDC42EP3Q9UKI2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42EP3Q9UKI2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.73■□□□□ 0.75
CDC42EP3Q9UKI2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42EP3Q9UKI2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42EP3Q9UKI2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42EP3Q9UKI2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.72■□□□□ 0.75
CDC42EP3Q9UKI2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.72■□□□□ 0.75
CDC42EP3Q9UKI2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.72■□□□□ 0.75
CDC42EP3Q9UKI2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.72■□□□□ 0.75
CDC42EP3Q9UKI2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.72■□□□□ 0.75
CDC42EP3Q9UKI2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.72■□□□□ 0.75
CDC42EP3Q9UKI2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.72■□□□□ 0.75
CDC42EP3Q9UKI2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42EP3Q9UKI2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42EP3Q9UKI2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42EP3Q9UKI2 AC021242.3-201ENST00000607598 1377 ntBASIC19.71■□□□□ 0.75
CDC42EP3Q9UKI2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.71■□□□□ 0.75
CDC42EP3Q9UKI2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42EP3Q9UKI2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDC42EP3Q9UKI2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42EP3Q9UKI2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.71■□□□□ 0.75
CDC42EP3Q9UKI2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.71■□□□□ 0.75
CDC42EP3Q9UKI2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.71■□□□□ 0.75
CDC42EP3Q9UKI2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42EP3Q9UKI2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42EP3Q9UKI2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.7■□□□□ 0.74
CDC42EP3Q9UKI2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP3Q9UKI2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDC42EP3Q9UKI2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.7■□□□□ 0.74
CDC42EP3Q9UKI2 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.7■□□□□ 0.74
CDC42EP3Q9UKI2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP3Q9UKI2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CDC42EP3Q9UKI2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP3Q9UKI2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP3Q9UKI2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP3Q9UKI2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDC42EP3Q9UKI2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP3Q9UKI2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP3Q9UKI2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.69■□□□□ 0.74
CDC42EP3Q9UKI2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.69■□□□□ 0.74
CDC42EP3Q9UKI2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP3Q9UKI2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.69■□□□□ 0.74
CDC42EP3Q9UKI2 AC131281.2-201ENST00000520478 145 ntBASIC19.69■□□□□ 0.74
CDC42EP3Q9UKI2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP3Q9UKI2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.69■□□□□ 0.74
CDC42EP3Q9UKI2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP3Q9UKI2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP3Q9UKI2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.69■□□□□ 0.74
CDC42EP3Q9UKI2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP3Q9UKI2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP3Q9UKI2 AL136116.3-201ENST00000402907 1138 ntBASIC19.68■□□□□ 0.74
CDC42EP3Q9UKI2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42EP3Q9UKI2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42EP3Q9UKI2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42EP3Q9UKI2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42EP3Q9UKI2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42EP3Q9UKI2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42EP3Q9UKI2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CDC42EP3Q9UKI2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42EP3Q9UKI2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42EP3Q9UKI2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.67■□□□□ 0.74
CDC42EP3Q9UKI2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42EP3Q9UKI2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42EP3Q9UKI2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.67■□□□□ 0.74
CDC42EP3Q9UKI2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.67■□□□□ 0.74
CDC42EP3Q9UKI2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42EP3Q9UKI2 AC092028.1-203ENST00000608262 953 ntBASIC19.67■□□□□ 0.74
CDC42EP3Q9UKI2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42EP3Q9UKI2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.66■□□□□ 0.74
CDC42EP3Q9UKI2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDC42EP3Q9UKI2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42EP3Q9UKI2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42EP3Q9UKI2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42EP3Q9UKI2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CDC42EP3Q9UKI2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.65■□□□□ 0.74
CDC42EP3Q9UKI2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDC42EP3Q9UKI2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC42EP3Q9UKI2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CDC42EP3Q9UKI2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDC42EP3Q9UKI2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC42EP3Q9UKI2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC42EP3Q9UKI2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDC42EP3Q9UKI2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms