Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
CCNL1Q9UK58 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CCNL1Q9UK58 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
CCNL1Q9UK58 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC30.79■■■□□ 2.52
CCNL1Q9UK58 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CCNL1Q9UK58 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CCNL1Q9UK58 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CCNL1Q9UK58 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CCNL1Q9UK58 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
CCNL1Q9UK58 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CCNL1Q9UK58 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC30.77■■■□□ 2.52
CCNL1Q9UK58 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CCNL1Q9UK58 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.77■■■□□ 2.52
CCNL1Q9UK58 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.77■■■□□ 2.52
CCNL1Q9UK58 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC30.77■■■□□ 2.52
CCNL1Q9UK58 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.52
CCNL1Q9UK58 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC30.76■■■□□ 2.51
CCNL1Q9UK58 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.76■■■□□ 2.51
CCNL1Q9UK58 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
CCNL1Q9UK58 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCNL1Q9UK58 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
CCNL1Q9UK58 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCNL1Q9UK58 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CCNL1Q9UK58 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CCNL1Q9UK58 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CCNL1Q9UK58 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC30.75■■■□□ 2.51
CCNL1Q9UK58 AC106739.1-201ENST00000617035 715 ntBASIC30.75■■■□□ 2.51
CCNL1Q9UK58 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.75■■■□□ 2.51
CCNL1Q9UK58 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
CCNL1Q9UK58 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CCNL1Q9UK58 CD72-202ENST00000378430 585 ntTSL 3 BASIC30.74■■■□□ 2.51
CCNL1Q9UK58 PBX2P1-201ENST00000493219 1291 ntBASIC30.74■■■□□ 2.51
CCNL1Q9UK58 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCNL1Q9UK58 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
CCNL1Q9UK58 AC142381.2-201ENST00000566120 298 ntBASIC30.73■■■□□ 2.51
CCNL1Q9UK58 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CCNL1Q9UK58 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
CCNL1Q9UK58 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CCNL1Q9UK58 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCNL1Q9UK58 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CCNL1Q9UK58 AC026271.2-201ENST00000428091 497 ntBASIC30.71■■■□□ 2.51
CCNL1Q9UK58 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CCNL1Q9UK58 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCNL1Q9UK58 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCNL1Q9UK58 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCNL1Q9UK58 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CCNL1Q9UK58 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CCNL1Q9UK58 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC30.69■■■□□ 2.5
CCNL1Q9UK58 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC30.68■■■□□ 2.5
CCNL1Q9UK58 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC30.68■■■□□ 2.5
CCNL1Q9UK58 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCNL1Q9UK58 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCNL1Q9UK58 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCNL1Q9UK58 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCNL1Q9UK58 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCNL1Q9UK58 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.66■■■□□ 2.5
CCNL1Q9UK58 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCNL1Q9UK58 AC142472.1-201ENST00000612013 1741 ntBASIC30.66■■■□□ 2.5
CCNL1Q9UK58 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCNL1Q9UK58 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCNL1Q9UK58 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCNL1Q9UK58 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
CCNL1Q9UK58 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC30.65■■■□□ 2.5
CCNL1Q9UK58 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.64■■■□□ 2.5
CCNL1Q9UK58 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCNL1Q9UK58 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCNL1Q9UK58 TFPT-201ENST00000391757 774 ntTSL 5 BASIC30.64■■■□□ 2.5
CCNL1Q9UK58 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCNL1Q9UK58 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CCNL1Q9UK58 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.63■■■□□ 2.49
CCNL1Q9UK58 AF131216.4-201ENST00000638924 1588 ntBASIC30.63■■■□□ 2.49
CCNL1Q9UK58 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCNL1Q9UK58 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC30.63■■■□□ 2.49
CCNL1Q9UK58 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC30.63■■■□□ 2.49
CCNL1Q9UK58 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC30.63■■■□□ 2.49
CCNL1Q9UK58 AL031432.3-201ENST00000607698 485 ntBASIC30.63■■■□□ 2.49
CCNL1Q9UK58 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC30.63■■■□□ 2.49
CCNL1Q9UK58 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC30.63■■■□□ 2.49
CCNL1Q9UK58 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCNL1Q9UK58 AC135279.3-201ENST00000610945 1311 ntBASIC30.63■■■□□ 2.49
CCNL1Q9UK58 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCNL1Q9UK58 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCNL1Q9UK58 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CCNL1Q9UK58 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.62■■■□□ 2.49
CCNL1Q9UK58 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC30.62■■■□□ 2.49
CCNL1Q9UK58 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC30.62■■■□□ 2.49
CCNL1Q9UK58 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.62■■■□□ 2.49
CCNL1Q9UK58 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CCNL1Q9UK58 LINC01003-201ENST00000564834 1764 ntBASIC30.61■■■□□ 2.49
CCNL1Q9UK58 DRD5P2-201ENST00000421395 2012 ntBASIC30.61■■■□□ 2.49
CCNL1Q9UK58 UNC93B3-201ENST00000308076 687 ntBASIC30.61■■■□□ 2.49
CCNL1Q9UK58 LGR4-203ENST00000480977 492 ntTSL 2 BASIC30.61■■■□□ 2.49
CCNL1Q9UK58 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC30.61■■■□□ 2.49
CCNL1Q9UK58 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC30.61■■■□□ 2.49
CCNL1Q9UK58 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CCNL1Q9UK58 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
CCNL1Q9UK58 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CCNL1Q9UK58 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CCNL1Q9UK58 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.6■■■□□ 2.49
CCNL1Q9UK58 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.6■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms