Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.09■■□□□ 1.29
LRIT1Q9P2V4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LRIT1Q9P2V4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
LRIT1Q9P2V4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
LRIT1Q9P2V4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
LRIT1Q9P2V4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LRIT1Q9P2V4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LRIT1Q9P2V4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.08■■□□□ 1.29
LRIT1Q9P2V4 AC137630.3-201ENST00000607245 391 ntBASIC23.08■■□□□ 1.29
LRIT1Q9P2V4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.08■■□□□ 1.29
LRIT1Q9P2V4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LRIT1Q9P2V4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.08■■□□□ 1.29
LRIT1Q9P2V4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
LRIT1Q9P2V4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LRIT1Q9P2V4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
LRIT1Q9P2V4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LRIT1Q9P2V4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LRIT1Q9P2V4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.07■■□□□ 1.28
LRIT1Q9P2V4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.07■■□□□ 1.28
LRIT1Q9P2V4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
LRIT1Q9P2V4 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.07■■□□□ 1.28
LRIT1Q9P2V4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
LRIT1Q9P2V4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LRIT1Q9P2V4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LRIT1Q9P2V4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.07■■□□□ 1.28
LRIT1Q9P2V4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.06■■□□□ 1.28
LRIT1Q9P2V4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LRIT1Q9P2V4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.06■■□□□ 1.28
LRIT1Q9P2V4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
LRIT1Q9P2V4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
LRIT1Q9P2V4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LRIT1Q9P2V4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
LRIT1Q9P2V4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.05■■□□□ 1.28
LRIT1Q9P2V4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.04■■□□□ 1.28
LRIT1Q9P2V4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
LRIT1Q9P2V4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.04■■□□□ 1.28
LRIT1Q9P2V4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
LRIT1Q9P2V4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LRIT1Q9P2V4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.03■■□□□ 1.28
LRIT1Q9P2V4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LRIT1Q9P2V4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LRIT1Q9P2V4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LRIT1Q9P2V4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LRIT1Q9P2V4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRIT1Q9P2V4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRIT1Q9P2V4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.02■■□□□ 1.28
LRIT1Q9P2V4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LRIT1Q9P2V4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRIT1Q9P2V4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.02■■□□□ 1.28
LRIT1Q9P2V4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
LRIT1Q9P2V4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRIT1Q9P2V4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRIT1Q9P2V4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRIT1Q9P2V4 AC021242.3-201ENST00000607598 1377 ntBASIC23.01■■□□□ 1.27
LRIT1Q9P2V4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRIT1Q9P2V4 AL121749.1-202ENST00000609313 2153 ntBASIC23.01■■□□□ 1.27
LRIT1Q9P2V4 UNC93B8-201ENST00000511903 705 ntBASIC23.01■■□□□ 1.27
LRIT1Q9P2V4 MIR4281-201ENST00000580852 62 ntBASIC23.01■■□□□ 1.27
LRIT1Q9P2V4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRIT1Q9P2V4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRIT1Q9P2V4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.01■■□□□ 1.27
LRIT1Q9P2V4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
LRIT1Q9P2V4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
LRIT1Q9P2V4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LRIT1Q9P2V4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23■■□□□ 1.27
LRIT1Q9P2V4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23■■□□□ 1.27
LRIT1Q9P2V4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23■■□□□ 1.27
LRIT1Q9P2V4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LRIT1Q9P2V4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23■■□□□ 1.27
LRIT1Q9P2V4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
LRIT1Q9P2V4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23■■□□□ 1.27
LRIT1Q9P2V4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
LRIT1Q9P2V4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23■■□□□ 1.27
LRIT1Q9P2V4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRIT1Q9P2V4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRIT1Q9P2V4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
LRIT1Q9P2V4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.99■■□□□ 1.27
LRIT1Q9P2V4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRIT1Q9P2V4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRIT1Q9P2V4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.99■■□□□ 1.27
LRIT1Q9P2V4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.99■■□□□ 1.27
LRIT1Q9P2V4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
LRIT1Q9P2V4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRIT1Q9P2V4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRIT1Q9P2V4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.98■■□□□ 1.27
LRIT1Q9P2V4 KRT16P3-201ENST00000439127 1283 ntBASIC22.98■■□□□ 1.27
LRIT1Q9P2V4 TSPY9P-201ENST00000440215 945 ntBASIC22.98■■□□□ 1.27
LRIT1Q9P2V4 TSPY11P-201ENST00000442607 1045 ntBASIC22.98■■□□□ 1.27
LRIT1Q9P2V4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.98■■□□□ 1.27
LRIT1Q9P2V4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
LRIT1Q9P2V4 AC011551.1-201ENST00000614101 683 ntBASIC22.97■■□□□ 1.27
LRIT1Q9P2V4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.97■■□□□ 1.27
LRIT1Q9P2V4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LRIT1Q9P2V4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
LRIT1Q9P2V4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.97■■□□□ 1.27
LRIT1Q9P2V4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRIT1Q9P2V4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.96■■□□□ 1.27
LRIT1Q9P2V4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.96■■□□□ 1.27
LRIT1Q9P2V4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.96■■□□□ 1.27
LRIT1Q9P2V4 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms