Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Q9N2K0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Q9N2K0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Q9N2K0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
Q9N2K0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Q9N2K0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Q9N2K0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Q9N2K0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Q9N2K0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.82■□□□□ 0.76
Q9N2K0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9N2K0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9N2K0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Q9N2K0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9N2K0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9N2K0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9N2K0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Q9N2K0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q9N2K0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.81■□□□□ 0.76
Q9N2K0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.81■□□□□ 0.76
Q9N2K0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q9N2K0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Q9N2K0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q9N2K0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
Q9N2K0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Q9N2K0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.8■□□□□ 0.76
Q9N2K0 SMPD5-203ENST00000639008 1464 ntBASIC19.8■□□□□ 0.76
Q9N2K0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Q9N2K0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9N2K0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9N2K0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9N2K0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Q9N2K0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Q9N2K0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Q9N2K0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9N2K0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Q9N2K0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Q9N2K0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Q9N2K0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9N2K0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9N2K0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9N2K0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9N2K0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9N2K0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9N2K0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Q9N2K0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Q9N2K0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q9N2K0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q9N2K0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Q9N2K0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q9N2K0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q9N2K0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.79■□□□□ 0.76
Q9N2K0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Q9N2K0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q9N2K0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q9N2K0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Q9N2K0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q9N2K0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.78■□□□□ 0.76
Q9N2K0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q9N2K0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q9N2K0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q9N2K0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q9N2K0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.78■□□□□ 0.76
Q9N2K0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Q9N2K0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q9N2K0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q9N2K0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q9N2K0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q9N2K0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.77■□□□□ 0.76
Q9N2K0 LINC00543-201ENST00000567234 1845 ntBASIC19.77■□□□□ 0.76
Q9N2K0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q9N2K0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.77■□□□□ 0.76
Q9N2K0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.77■□□□□ 0.76
Q9N2K0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.77■□□□□ 0.76
Q9N2K0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q9N2K0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Q9N2K0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.77■□□□□ 0.75
Q9N2K0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Q9N2K0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q9N2K0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Q9N2K0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.76■□□□□ 0.75
Q9N2K0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.76■□□□□ 0.75
Q9N2K0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q9N2K0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q9N2K0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q9N2K0 AC092296.2-201ENST00000589470 999 ntBASIC19.76■□□□□ 0.75
Q9N2K0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q9N2K0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Q9N2K0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.76■□□□□ 0.75
Q9N2K0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Q9N2K0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.75■□□□□ 0.75
Q9N2K0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q9N2K0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q9N2K0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.74■□□□□ 0.75
Q9N2K0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q9N2K0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q9N2K0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.74■□□□□ 0.75
Q9N2K0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q9N2K0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.74■□□□□ 0.75
Q9N2K0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Q9N2K0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms