Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.13■■□□□ 1.61
SEMA4AQ9H3S1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SEMA4AQ9H3S1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
SEMA4AQ9H3S1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SEMA4AQ9H3S1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SEMA4AQ9H3S1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SEMA4AQ9H3S1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SEMA4AQ9H3S1 AL031848.2-201ENST00000607670 837 ntBASIC25.12■■□□□ 1.61
SEMA4AQ9H3S1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SEMA4AQ9H3S1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.12■■□□□ 1.61
SEMA4AQ9H3S1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
SEMA4AQ9H3S1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SEMA4AQ9H3S1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.11■■□□□ 1.61
SEMA4AQ9H3S1 RAP2CP1-202ENST00000605179 643 ntBASIC25.11■■□□□ 1.61
SEMA4AQ9H3S1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.11■■□□□ 1.61
SEMA4AQ9H3S1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SEMA4AQ9H3S1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SEMA4AQ9H3S1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.1■■□□□ 1.61
SEMA4AQ9H3S1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
SEMA4AQ9H3S1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SEMA4AQ9H3S1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.1■■□□□ 1.61
SEMA4AQ9H3S1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
SEMA4AQ9H3S1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
SEMA4AQ9H3S1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
SEMA4AQ9H3S1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
SEMA4AQ9H3S1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SEMA4AQ9H3S1 SPCS2P3-201ENST00000500401 656 ntBASIC25.09■■□□□ 1.61
SEMA4AQ9H3S1 AC018755.3-202ENST00000596210 929 ntBASIC25.09■■□□□ 1.61
SEMA4AQ9H3S1 PVT1_1.1-201ENST00000615125 194 ntBASIC25.09■■□□□ 1.61
SEMA4AQ9H3S1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.09■■□□□ 1.61
SEMA4AQ9H3S1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.09■■□□□ 1.61
SEMA4AQ9H3S1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SEMA4AQ9H3S1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
SEMA4AQ9H3S1 ERN1-208ENST00000606895 2068 ntBASIC25.09■■□□□ 1.61
SEMA4AQ9H3S1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
SEMA4AQ9H3S1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SEMA4AQ9H3S1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
SEMA4AQ9H3S1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SEMA4AQ9H3S1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.08■■□□□ 1.61
SEMA4AQ9H3S1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SEMA4AQ9H3S1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
SEMA4AQ9H3S1 AC093536.1-201ENST00000569153 554 ntBASIC25.07■■□□□ 1.6
SEMA4AQ9H3S1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.07■■□□□ 1.6
SEMA4AQ9H3S1 WHAMMP3-201ENST00000611636 1609 ntBASIC25.07■■□□□ 1.6
SEMA4AQ9H3S1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SEMA4AQ9H3S1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SEMA4AQ9H3S1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
SEMA4AQ9H3S1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.06■■□□□ 1.6
SEMA4AQ9H3S1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.06■■□□□ 1.6
SEMA4AQ9H3S1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SEMA4AQ9H3S1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.06■■□□□ 1.6
SEMA4AQ9H3S1 AC103724.3-201ENST00000564481 992 ntBASIC25.06■■□□□ 1.6
SEMA4AQ9H3S1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SEMA4AQ9H3S1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.05■■□□□ 1.6
SEMA4AQ9H3S1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SEMA4AQ9H3S1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SEMA4AQ9H3S1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
SEMA4AQ9H3S1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
SEMA4AQ9H3S1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.05■■□□□ 1.6
SEMA4AQ9H3S1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SEMA4AQ9H3S1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SEMA4AQ9H3S1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.04■■□□□ 1.6
SEMA4AQ9H3S1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.04■■□□□ 1.6
SEMA4AQ9H3S1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.04■■□□□ 1.6
SEMA4AQ9H3S1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SEMA4AQ9H3S1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.04■■□□□ 1.6
SEMA4AQ9H3S1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.04■■□□□ 1.6
SEMA4AQ9H3S1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.04■■□□□ 1.6
SEMA4AQ9H3S1 Z92544.1-202ENST00000571933 1220 ntBASIC25.04■■□□□ 1.6
SEMA4AQ9H3S1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
SEMA4AQ9H3S1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.04■■□□□ 1.6
SEMA4AQ9H3S1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SEMA4AQ9H3S1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SEMA4AQ9H3S1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SEMA4AQ9H3S1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
SEMA4AQ9H3S1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
SEMA4AQ9H3S1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SEMA4AQ9H3S1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.02■■□□□ 1.6
SEMA4AQ9H3S1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SEMA4AQ9H3S1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SEMA4AQ9H3S1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SEMA4AQ9H3S1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.02■■□□□ 1.6
SEMA4AQ9H3S1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.02■■□□□ 1.6
SEMA4AQ9H3S1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.01■■□□□ 1.59
SEMA4AQ9H3S1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SEMA4AQ9H3S1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SEMA4AQ9H3S1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SEMA4AQ9H3S1 MIR638-201ENST00000385237 100 ntBASIC25.01■■□□□ 1.59
SEMA4AQ9H3S1 AC239859.2-201ENST00000444165 318 ntBASIC25.01■■□□□ 1.59
SEMA4AQ9H3S1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.01■■□□□ 1.59
SEMA4AQ9H3S1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.01■■□□□ 1.59
SEMA4AQ9H3S1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.01■■□□□ 1.59
SEMA4AQ9H3S1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
SEMA4AQ9H3S1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25■■□□□ 1.59
SEMA4AQ9H3S1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SEMA4AQ9H3S1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
SEMA4AQ9H3S1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
SEMA4AQ9H3S1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25■■□□□ 1.59
SEMA4AQ9H3S1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
SEMA4AQ9H3S1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms