Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.76■■□□□ 1.55
CDK5RAP1Q96SZ6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDK5RAP1Q96SZ6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDK5RAP1Q96SZ6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CDK5RAP1Q96SZ6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CDK5RAP1Q96SZ6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CDK5RAP1Q96SZ6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CDK5RAP1Q96SZ6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDK5RAP1Q96SZ6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.76■■□□□ 1.55
CDK5RAP1Q96SZ6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDK5RAP1Q96SZ6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDK5RAP1Q96SZ6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.76■■□□□ 1.55
CDK5RAP1Q96SZ6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CDK5RAP1Q96SZ6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDK5RAP1Q96SZ6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDK5RAP1Q96SZ6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
CDK5RAP1Q96SZ6 KRT18P24-201ENST00000344739 1156 ntBASIC24.74■■□□□ 1.55
CDK5RAP1Q96SZ6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.74■■□□□ 1.55
CDK5RAP1Q96SZ6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.74■■□□□ 1.55
CDK5RAP1Q96SZ6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDK5RAP1Q96SZ6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.73■■□□□ 1.55
CDK5RAP1Q96SZ6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDK5RAP1Q96SZ6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDK5RAP1Q96SZ6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
CDK5RAP1Q96SZ6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
CDK5RAP1Q96SZ6 AL035685.1-201ENST00000636663 812 ntBASIC24.73■■□□□ 1.55
CDK5RAP1Q96SZ6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
CDK5RAP1Q96SZ6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDK5RAP1Q96SZ6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDK5RAP1Q96SZ6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CDK5RAP1Q96SZ6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDK5RAP1Q96SZ6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDK5RAP1Q96SZ6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDK5RAP1Q96SZ6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDK5RAP1Q96SZ6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.72■■□□□ 1.55
CDK5RAP1Q96SZ6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.72■■□□□ 1.55
CDK5RAP1Q96SZ6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDK5RAP1Q96SZ6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDK5RAP1Q96SZ6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDK5RAP1Q96SZ6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDK5RAP1Q96SZ6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
CDK5RAP1Q96SZ6 THA1P-201ENST00000590384 1145 ntBASIC24.71■■□□□ 1.55
CDK5RAP1Q96SZ6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDK5RAP1Q96SZ6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDK5RAP1Q96SZ6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
CDK5RAP1Q96SZ6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDK5RAP1Q96SZ6 AC009299.2-201ENST00000482477 511 ntBASIC24.7■■□□□ 1.54
CDK5RAP1Q96SZ6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.7■■□□□ 1.54
CDK5RAP1Q96SZ6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CDK5RAP1Q96SZ6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.7■■□□□ 1.54
CDK5RAP1Q96SZ6 DUSP8P4-201ENST00000399538 1761 ntBASIC24.7■■□□□ 1.54
CDK5RAP1Q96SZ6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
CDK5RAP1Q96SZ6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.69■■□□□ 1.54
CDK5RAP1Q96SZ6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDK5RAP1Q96SZ6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.68■■□□□ 1.54
CDK5RAP1Q96SZ6 AC011551.1-201ENST00000614101 683 ntBASIC24.68■■□□□ 1.54
CDK5RAP1Q96SZ6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CDK5RAP1Q96SZ6 FOXO3B-201ENST00000395675 1928 ntBASIC24.68■■□□□ 1.54
CDK5RAP1Q96SZ6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDK5RAP1Q96SZ6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDK5RAP1Q96SZ6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.67■■□□□ 1.54
CDK5RAP1Q96SZ6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDK5RAP1Q96SZ6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.67■■□□□ 1.54
CDK5RAP1Q96SZ6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDK5RAP1Q96SZ6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDK5RAP1Q96SZ6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.67■■□□□ 1.54
CDK5RAP1Q96SZ6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.67■■□□□ 1.54
CDK5RAP1Q96SZ6 AC145676.1-201ENST00000514988 2004 ntBASIC24.66■■□□□ 1.54
CDK5RAP1Q96SZ6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDK5RAP1Q96SZ6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDK5RAP1Q96SZ6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDK5RAP1Q96SZ6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.66■■□□□ 1.54
CDK5RAP1Q96SZ6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDK5RAP1Q96SZ6 AC120024.1-201ENST00000562672 995 ntBASIC24.65■■□□□ 1.54
CDK5RAP1Q96SZ6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.65■■□□□ 1.54
CDK5RAP1Q96SZ6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
CDK5RAP1Q96SZ6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
CDK5RAP1Q96SZ6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDK5RAP1Q96SZ6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDK5RAP1Q96SZ6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.64■■□□□ 1.54
CDK5RAP1Q96SZ6 AC091060.1-201ENST00000623524 1766 ntBASIC24.64■■□□□ 1.53
CDK5RAP1Q96SZ6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
CDK5RAP1Q96SZ6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.63■■□□□ 1.53
CDK5RAP1Q96SZ6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDK5RAP1Q96SZ6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
CDK5RAP1Q96SZ6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDK5RAP1Q96SZ6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.62■■□□□ 1.53
CDK5RAP1Q96SZ6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CDK5RAP1Q96SZ6 Z92544.1-202ENST00000571933 1220 ntBASIC24.62■■□□□ 1.53
CDK5RAP1Q96SZ6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.62■■□□□ 1.53
CDK5RAP1Q96SZ6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDK5RAP1Q96SZ6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDK5RAP1Q96SZ6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDK5RAP1Q96SZ6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
CDK5RAP1Q96SZ6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDK5RAP1Q96SZ6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.61■■□□□ 1.53
CDK5RAP1Q96SZ6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.61■■□□□ 1.53
CDK5RAP1Q96SZ6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDK5RAP1Q96SZ6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDK5RAP1Q96SZ6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms