Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SLC6A18Q96N87 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC6A18Q96N87 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC6A18Q96N87 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.65■■□□□ 1.38
SLC6A18Q96N87 TSPY9P-201ENST00000440215 945 ntBASIC23.65■■□□□ 1.38
SLC6A18Q96N87 TSPY11P-201ENST00000442607 1045 ntBASIC23.65■■□□□ 1.38
SLC6A18Q96N87 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.65■■□□□ 1.38
SLC6A18Q96N87 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.65■■□□□ 1.38
SLC6A18Q96N87 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLC6A18Q96N87 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLC6A18Q96N87 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A18Q96N87 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A18Q96N87 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A18Q96N87 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
SLC6A18Q96N87 AC008406.3-201ENST00000620001 1374 ntBASIC23.64■■□□□ 1.37
SLC6A18Q96N87 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SLC6A18Q96N87 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.63■■□□□ 1.37
SLC6A18Q96N87 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLC6A18Q96N87 AC021242.3-201ENST00000607598 1377 ntBASIC23.63■■□□□ 1.37
SLC6A18Q96N87 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.62■■□□□ 1.37
SLC6A18Q96N87 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.62■■□□□ 1.37
SLC6A18Q96N87 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.62■■□□□ 1.37
SLC6A18Q96N87 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A18Q96N87 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A18Q96N87 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A18Q96N87 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A18Q96N87 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A18Q96N87 AL121749.1-202ENST00000609313 2153 ntBASIC23.61■■□□□ 1.37
SLC6A18Q96N87 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A18Q96N87 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.61■■□□□ 1.37
SLC6A18Q96N87 MIR4281-201ENST00000580852 62 ntBASIC23.61■■□□□ 1.37
SLC6A18Q96N87 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.61■■□□□ 1.37
SLC6A18Q96N87 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SLC6A18Q96N87 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A18Q96N87 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A18Q96N87 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A18Q96N87 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A18Q96N87 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A18Q96N87 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.6■■□□□ 1.37
SLC6A18Q96N87 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.6■■□□□ 1.37
SLC6A18Q96N87 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
SLC6A18Q96N87 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A18Q96N87 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A18Q96N87 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.59■■□□□ 1.37
SLC6A18Q96N87 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.59■■□□□ 1.37
SLC6A18Q96N87 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SLC6A18Q96N87 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.59■■□□□ 1.37
SLC6A18Q96N87 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A18Q96N87 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.59■■□□□ 1.37
SLC6A18Q96N87 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SLC6A18Q96N87 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.58■■□□□ 1.37
SLC6A18Q96N87 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.57■■□□□ 1.36
SLC6A18Q96N87 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A18Q96N87 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A18Q96N87 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A18Q96N87 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.57■■□□□ 1.36
SLC6A18Q96N87 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.57■■□□□ 1.36
SLC6A18Q96N87 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A18Q96N87 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A18Q96N87 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A18Q96N87 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A18Q96N87 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
SLC6A18Q96N87 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A18Q96N87 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.56■■□□□ 1.36
SLC6A18Q96N87 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.56■■□□□ 1.36
SLC6A18Q96N87 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC6A18Q96N87 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
SLC6A18Q96N87 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC6A18Q96N87 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.55■■□□□ 1.36
SLC6A18Q96N87 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.55■■□□□ 1.36
SLC6A18Q96N87 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.55■■□□□ 1.36
SLC6A18Q96N87 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.55■■□□□ 1.36
SLC6A18Q96N87 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.55■■□□□ 1.36
SLC6A18Q96N87 AC092028.1-203ENST00000608262 953 ntBASIC23.55■■□□□ 1.36
SLC6A18Q96N87 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
SLC6A18Q96N87 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.54■■□□□ 1.36
SLC6A18Q96N87 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
SLC6A18Q96N87 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.54■■□□□ 1.36
SLC6A18Q96N87 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.53■■□□□ 1.36
SLC6A18Q96N87 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC6A18Q96N87 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC6A18Q96N87 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC6A18Q96N87 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC6A18Q96N87 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
SLC6A18Q96N87 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SLC6A18Q96N87 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC6A18Q96N87 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC6A18Q96N87 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC6A18Q96N87 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.51■■□□□ 1.35
SLC6A18Q96N87 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.51■■□□□ 1.35
SLC6A18Q96N87 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
SLC6A18Q96N87 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.51■■□□□ 1.35
SLC6A18Q96N87 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SLC6A18Q96N87 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SLC6A18Q96N87 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SLC6A18Q96N87 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
SLC6A18Q96N87 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SLC6A18Q96N87 AC011551.1-201ENST00000614101 683 ntBASIC23.5■■□□□ 1.35
SLC6A18Q96N87 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SLC6A18Q96N87 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms