Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SLC6A18Q96N87 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC6A18Q96N87 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC6A18Q96N87 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.65■■□□□ 1.38
SLC6A18Q96N87 TSPY9P-201ENST00000440215 945 ntBASIC23.65■■□□□ 1.38
SLC6A18Q96N87 TSPY11P-201ENST00000442607 1045 ntBASIC23.65■■□□□ 1.38
SLC6A18Q96N87 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.65■■□□□ 1.38
SLC6A18Q96N87 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.65■■□□□ 1.38
SLC6A18Q96N87 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLC6A18Q96N87 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLC6A18Q96N87 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A18Q96N87 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A18Q96N87 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A18Q96N87 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
SLC6A18Q96N87 AC008406.3-201ENST00000620001 1374 ntBASIC23.64■■□□□ 1.37
SLC6A18Q96N87 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SLC6A18Q96N87 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.63■■□□□ 1.37
SLC6A18Q96N87 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLC6A18Q96N87 AC021242.3-201ENST00000607598 1377 ntBASIC23.63■■□□□ 1.37
SLC6A18Q96N87 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.62■■□□□ 1.37
SLC6A18Q96N87 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.62■■□□□ 1.37
SLC6A18Q96N87 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.62■■□□□ 1.37
SLC6A18Q96N87 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A18Q96N87 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A18Q96N87 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A18Q96N87 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A18Q96N87 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A18Q96N87 AL121749.1-202ENST00000609313 2153 ntBASIC23.61■■□□□ 1.37
SLC6A18Q96N87 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A18Q96N87 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.61■■□□□ 1.37
SLC6A18Q96N87 MIR4281-201ENST00000580852 62 ntBASIC23.61■■□□□ 1.37
SLC6A18Q96N87 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.61■■□□□ 1.37
SLC6A18Q96N87 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SLC6A18Q96N87 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A18Q96N87 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A18Q96N87 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A18Q96N87 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A18Q96N87 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A18Q96N87 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.6■■□□□ 1.37
SLC6A18Q96N87 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.6■■□□□ 1.37
SLC6A18Q96N87 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
SLC6A18Q96N87 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A18Q96N87 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A18Q96N87 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.59■■□□□ 1.37
SLC6A18Q96N87 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.59■■□□□ 1.37
SLC6A18Q96N87 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SLC6A18Q96N87 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.59■■□□□ 1.37
SLC6A18Q96N87 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A18Q96N87 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.59■■□□□ 1.37
SLC6A18Q96N87 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SLC6A18Q96N87 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.58■■□□□ 1.37
SLC6A18Q96N87 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.57■■□□□ 1.36
SLC6A18Q96N87 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A18Q96N87 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A18Q96N87 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A18Q96N87 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.57■■□□□ 1.36
SLC6A18Q96N87 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.57■■□□□ 1.36
SLC6A18Q96N87 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A18Q96N87 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A18Q96N87 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A18Q96N87 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A18Q96N87 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
SLC6A18Q96N87 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A18Q96N87 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.56■■□□□ 1.36
SLC6A18Q96N87 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.56■■□□□ 1.36
SLC6A18Q96N87 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC6A18Q96N87 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
SLC6A18Q96N87 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC6A18Q96N87 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.55■■□□□ 1.36
SLC6A18Q96N87 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.55■■□□□ 1.36
SLC6A18Q96N87 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.55■■□□□ 1.36
SLC6A18Q96N87 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.55■■□□□ 1.36
SLC6A18Q96N87 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.55■■□□□ 1.36
SLC6A18Q96N87 AC092028.1-203ENST00000608262 953 ntBASIC23.55■■□□□ 1.36
SLC6A18Q96N87 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
SLC6A18Q96N87 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.54■■□□□ 1.36
SLC6A18Q96N87 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
SLC6A18Q96N87 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.54■■□□□ 1.36
SLC6A18Q96N87 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.53■■□□□ 1.36
SLC6A18Q96N87 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC6A18Q96N87 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC6A18Q96N87 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC6A18Q96N87 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC6A18Q96N87 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
SLC6A18Q96N87 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SLC6A18Q96N87 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC6A18Q96N87 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC6A18Q96N87 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC6A18Q96N87 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.51■■□□□ 1.35
SLC6A18Q96N87 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.51■■□□□ 1.35
SLC6A18Q96N87 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
SLC6A18Q96N87 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.51■■□□□ 1.35
SLC6A18Q96N87 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SLC6A18Q96N87 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SLC6A18Q96N87 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SLC6A18Q96N87 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
SLC6A18Q96N87 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SLC6A18Q96N87 AC011551.1-201ENST00000614101 683 ntBASIC23.5■■□□□ 1.35
SLC6A18Q96N87 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SLC6A18Q96N87 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms