Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFAP53Q96M91 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFAP53Q96M91 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC31.91■■■□□ 2.7
CFAP53Q96M91 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.91■■■□□ 2.7
CFAP53Q96M91 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.91■■■□□ 2.7
CFAP53Q96M91 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CFAP53Q96M91 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFAP53Q96M91 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFAP53Q96M91 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFAP53Q96M91 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.9■■■□□ 2.7
CFAP53Q96M91 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CFAP53Q96M91 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
CFAP53Q96M91 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
CFAP53Q96M91 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC31.89■■■□□ 2.7
CFAP53Q96M91 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC31.89■■■□□ 2.7
CFAP53Q96M91 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
CFAP53Q96M91 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.89■■■□□ 2.7
CFAP53Q96M91 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.89■■■□□ 2.7
CFAP53Q96M91 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CFAP53Q96M91 CREM-210ENST00000374721 2020 ntTSL 5 BASIC31.88■■■□□ 2.69
CFAP53Q96M91 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
CFAP53Q96M91 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.88■■■□□ 2.69
CFAP53Q96M91 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.88■■■□□ 2.69
CFAP53Q96M91 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC31.87■■■□□ 2.69
CFAP53Q96M91 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CFAP53Q96M91 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC31.87■■■□□ 2.69
CFAP53Q96M91 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CFAP53Q96M91 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CFAP53Q96M91 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CFAP53Q96M91 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.86■■■□□ 2.69
CFAP53Q96M91 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CFAP53Q96M91 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC31.86■■■□□ 2.69
CFAP53Q96M91 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CFAP53Q96M91 AC022616.5-201ENST00000518796 181 ntBASIC31.86■■■□□ 2.69
CFAP53Q96M91 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CFAP53Q96M91 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.86■■■□□ 2.69
CFAP53Q96M91 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CFAP53Q96M91 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
CFAP53Q96M91 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
CFAP53Q96M91 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
CFAP53Q96M91 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
CFAP53Q96M91 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CFAP53Q96M91 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC31.84■■■□□ 2.69
CFAP53Q96M91 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CFAP53Q96M91 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CFAP53Q96M91 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CFAP53Q96M91 AL592295.1-201ENST00000400984 884 ntBASIC31.83■■■□□ 2.69
CFAP53Q96M91 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CFAP53Q96M91 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CFAP53Q96M91 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CFAP53Q96M91 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CFAP53Q96M91 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
CFAP53Q96M91 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CFAP53Q96M91 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC31.82■■■□□ 2.68
CFAP53Q96M91 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC31.81■■■□□ 2.68
CFAP53Q96M91 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
CFAP53Q96M91 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC31.81■■■□□ 2.68
CFAP53Q96M91 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC31.81■■■□□ 2.68
CFAP53Q96M91 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.8■■■□□ 2.68
CFAP53Q96M91 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CFAP53Q96M91 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
CFAP53Q96M91 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CFAP53Q96M91 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CFAP53Q96M91 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CFAP53Q96M91 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CFAP53Q96M91 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CFAP53Q96M91 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.78■■■□□ 2.68
CFAP53Q96M91 AC103724.3-201ENST00000564481 992 ntBASIC31.78■■■□□ 2.68
CFAP53Q96M91 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC31.78■■■□□ 2.68
CFAP53Q96M91 FOXO3B-201ENST00000395675 1928 ntBASIC31.78■■■□□ 2.68
CFAP53Q96M91 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
CFAP53Q96M91 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CFAP53Q96M91 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CFAP53Q96M91 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CFAP53Q96M91 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CFAP53Q96M91 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CFAP53Q96M91 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
CFAP53Q96M91 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CFAP53Q96M91 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
CFAP53Q96M91 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CFAP53Q96M91 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
CFAP53Q96M91 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
CFAP53Q96M91 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC31.76■■■□□ 2.68
CFAP53Q96M91 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.76■■■□□ 2.67
CFAP53Q96M91 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
CFAP53Q96M91 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.75■■■□□ 2.67
CFAP53Q96M91 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CFAP53Q96M91 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC31.75■■■□□ 2.67
CFAP53Q96M91 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
CFAP53Q96M91 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.75■■■□□ 2.67
CFAP53Q96M91 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
CFAP53Q96M91 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CFAP53Q96M91 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CFAP53Q96M91 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CFAP53Q96M91 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC31.74■■■□□ 2.67
CFAP53Q96M91 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CFAP53Q96M91 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
CFAP53Q96M91 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
CFAP53Q96M91 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CFAP53Q96M91 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31.73■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms