Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 AL451085.2-201ENST00000605085 799 ntBASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 DUSP8P4-201ENST00000399538 1761 ntBASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.51■□□□□ 0.71
SSMEM1Q8WWF3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSMEM1Q8WWF3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SSMEM1Q8WWF3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSMEM1Q8WWF3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSMEM1Q8WWF3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 KRT18P10-201ENST00000388836 1287 ntBASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSMEM1Q8WWF3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 MIR4508-201ENST00000584178 70 ntBASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SSMEM1Q8WWF3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSMEM1Q8WWF3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.47■□□□□ 0.71
SSMEM1Q8WWF3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSMEM1Q8WWF3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SSMEM1Q8WWF3 AC019171.1-201ENST00000601251 1056 ntBASIC19.47■□□□□ 0.71
SSMEM1Q8WWF3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSMEM1Q8WWF3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 AC103834.1-201ENST00000520383 144 ntBASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 AC087393.1-201ENST00000582896 145 ntBASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 PVT1_1.1-201ENST00000615125 194 ntBASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSMEM1Q8WWF3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSMEM1Q8WWF3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.45■□□□□ 0.7
SSMEM1Q8WWF3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSMEM1Q8WWF3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSMEM1Q8WWF3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSMEM1Q8WWF3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSMEM1Q8WWF3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSMEM1Q8WWF3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SSMEM1Q8WWF3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSMEM1Q8WWF3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSMEM1Q8WWF3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
SSMEM1Q8WWF3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSMEM1Q8WWF3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSMEM1Q8WWF3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSMEM1Q8WWF3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.43■□□□□ 0.7
SSMEM1Q8WWF3 RPS2P7-201ENST00000447334 885 ntBASIC19.43■□□□□ 0.7
SSMEM1Q8WWF3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSMEM1Q8WWF3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSMEM1Q8WWF3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 AC009299.2-201ENST00000482477 511 ntBASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.42■□□□□ 0.7
SSMEM1Q8WWF3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSMEM1Q8WWF3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSMEM1Q8WWF3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSMEM1Q8WWF3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSMEM1Q8WWF3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSMEM1Q8WWF3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSMEM1Q8WWF3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.41■□□□□ 0.7
SSMEM1Q8WWF3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
SSMEM1Q8WWF3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms