Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPS4Y2Q8TD47 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.82■□□□□ 0.92
RPS4Y2Q8TD47 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RPS4Y2Q8TD47 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RPS4Y2Q8TD47 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.82■□□□□ 0.92
RPS4Y2Q8TD47 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.82■□□□□ 0.92
RPS4Y2Q8TD47 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 AC012676.1-201ENST00000574705 1949 ntBASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPS4Y2Q8TD47 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.8■□□□□ 0.92
RPS4Y2Q8TD47 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RPS4Y2Q8TD47 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.8■□□□□ 0.92
RPS4Y2Q8TD47 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.8■□□□□ 0.92
RPS4Y2Q8TD47 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPS4Y2Q8TD47 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPS4Y2Q8TD47 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
RPS4Y2Q8TD47 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.79■□□□□ 0.92
RPS4Y2Q8TD47 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPS4Y2Q8TD47 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.79■□□□□ 0.92
RPS4Y2Q8TD47 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPS4Y2Q8TD47 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.79■□□□□ 0.92
RPS4Y2Q8TD47 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.79■□□□□ 0.92
RPS4Y2Q8TD47 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4Y2Q8TD47 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4Y2Q8TD47 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RPS4Y2Q8TD47 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4Y2Q8TD47 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.78■□□□□ 0.92
RPS4Y2Q8TD47 AC126177.7-201ENST00000547904 679 ntBASIC20.78■□□□□ 0.92
RPS4Y2Q8TD47 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RPS4Y2Q8TD47 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4Y2Q8TD47 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4Y2Q8TD47 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
RPS4Y2Q8TD47 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS4Y2Q8TD47 MIR6089-201ENST00000616698 64 ntBASIC20.77■□□□□ 0.92
RPS4Y2Q8TD47 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS4Y2Q8TD47 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.77■□□□□ 0.92
RPS4Y2Q8TD47 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.76■□□□□ 0.91
RPS4Y2Q8TD47 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4Y2Q8TD47 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RPS4Y2Q8TD47 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4Y2Q8TD47 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4Y2Q8TD47 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4Y2Q8TD47 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4Y2Q8TD47 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.76■□□□□ 0.91
RPS4Y2Q8TD47 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.73■□□□□ 0.91
RPS4Y2Q8TD47 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y2Q8TD47 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RPS4Y2Q8TD47 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y2Q8TD47 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y2Q8TD47 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RPS4Y2Q8TD47 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y2Q8TD47 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 AC133561.1-201ENST00000568600 2415 ntBASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 MIR3648-2-201ENST00000581792 180 ntBASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 MIR3648-1-201ENST00000615959 180 ntBASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.71■□□□□ 0.91
RPS4Y2Q8TD47 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.71■□□□□ 0.91
RPS4Y2Q8TD47 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.71■□□□□ 0.91
RPS4Y2Q8TD47 AC068473.5-201ENST00000616428 2072 ntBASIC20.71■□□□□ 0.91
RPS4Y2Q8TD47 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS4Y2Q8TD47 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPS4Y2Q8TD47 CR559946.2-201ENST00000623684 991 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms