Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPS4Y2Q8TD47 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.82■□□□□ 0.92
RPS4Y2Q8TD47 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RPS4Y2Q8TD47 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RPS4Y2Q8TD47 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.82■□□□□ 0.92
RPS4Y2Q8TD47 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.82■□□□□ 0.92
RPS4Y2Q8TD47 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 AC012676.1-201ENST00000574705 1949 ntBASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPS4Y2Q8TD47 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPS4Y2Q8TD47 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.8■□□□□ 0.92
RPS4Y2Q8TD47 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RPS4Y2Q8TD47 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.8■□□□□ 0.92
RPS4Y2Q8TD47 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.8■□□□□ 0.92
RPS4Y2Q8TD47 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPS4Y2Q8TD47 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPS4Y2Q8TD47 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
RPS4Y2Q8TD47 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.79■□□□□ 0.92
RPS4Y2Q8TD47 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPS4Y2Q8TD47 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.79■□□□□ 0.92
RPS4Y2Q8TD47 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPS4Y2Q8TD47 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.79■□□□□ 0.92
RPS4Y2Q8TD47 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.79■□□□□ 0.92
RPS4Y2Q8TD47 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4Y2Q8TD47 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4Y2Q8TD47 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RPS4Y2Q8TD47 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4Y2Q8TD47 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.78■□□□□ 0.92
RPS4Y2Q8TD47 AC126177.7-201ENST00000547904 679 ntBASIC20.78■□□□□ 0.92
RPS4Y2Q8TD47 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RPS4Y2Q8TD47 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4Y2Q8TD47 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4Y2Q8TD47 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
RPS4Y2Q8TD47 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS4Y2Q8TD47 MIR6089-201ENST00000616698 64 ntBASIC20.77■□□□□ 0.92
RPS4Y2Q8TD47 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS4Y2Q8TD47 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.77■□□□□ 0.92
RPS4Y2Q8TD47 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.76■□□□□ 0.91
RPS4Y2Q8TD47 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4Y2Q8TD47 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RPS4Y2Q8TD47 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4Y2Q8TD47 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4Y2Q8TD47 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4Y2Q8TD47 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4Y2Q8TD47 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.76■□□□□ 0.91
RPS4Y2Q8TD47 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4Y2Q8TD47 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4Y2Q8TD47 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.73■□□□□ 0.91
RPS4Y2Q8TD47 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y2Q8TD47 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RPS4Y2Q8TD47 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y2Q8TD47 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y2Q8TD47 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RPS4Y2Q8TD47 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4Y2Q8TD47 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 AC133561.1-201ENST00000568600 2415 ntBASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 MIR3648-2-201ENST00000581792 180 ntBASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 MIR3648-1-201ENST00000615959 180 ntBASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.72■□□□□ 0.91
RPS4Y2Q8TD47 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.71■□□□□ 0.91
RPS4Y2Q8TD47 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.71■□□□□ 0.91
RPS4Y2Q8TD47 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.71■□□□□ 0.91
RPS4Y2Q8TD47 AC068473.5-201ENST00000616428 2072 ntBASIC20.71■□□□□ 0.91
RPS4Y2Q8TD47 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS4Y2Q8TD47 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPS4Y2Q8TD47 CR559946.2-201ENST00000623684 991 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms