Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
TRPM4Q8TD43 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
TRPM4Q8TD43 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TRPM4Q8TD43 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TRPM4Q8TD43 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC28.67■■■□□ 2.18
TRPM4Q8TD43 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
TRPM4Q8TD43 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
TRPM4Q8TD43 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.66■■■□□ 2.18
TRPM4Q8TD43 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
TRPM4Q8TD43 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
TRPM4Q8TD43 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TRPM4Q8TD43 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC28.65■■■□□ 2.18
TRPM4Q8TD43 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TRPM4Q8TD43 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TRPM4Q8TD43 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
TRPM4Q8TD43 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TRPM4Q8TD43 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC28.64■■■□□ 2.18
TRPM4Q8TD43 CLTA-210ENST00000540080 989 ntTSL 2 BASIC28.64■■■□□ 2.18
TRPM4Q8TD43 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
TRPM4Q8TD43 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
TRPM4Q8TD43 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TRPM4Q8TD43 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TRPM4Q8TD43 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TRPM4Q8TD43 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
TRPM4Q8TD43 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
TRPM4Q8TD43 CD72-202ENST00000378430 585 ntTSL 3 BASIC28.63■■■□□ 2.17
TRPM4Q8TD43 AC026271.2-201ENST00000428091 497 ntBASIC28.63■■■□□ 2.17
TRPM4Q8TD43 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
TRPM4Q8TD43 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TRPM4Q8TD43 AC011551.1-201ENST00000614101 683 ntBASIC28.62■■■□□ 2.17
TRPM4Q8TD43 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
TRPM4Q8TD43 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TRPM4Q8TD43 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC28.61■■■□□ 2.17
TRPM4Q8TD43 AC106739.1-201ENST00000617035 715 ntBASIC28.61■■■□□ 2.17
TRPM4Q8TD43 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TRPM4Q8TD43 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
TRPM4Q8TD43 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC28.6■■■□□ 2.17
TRPM4Q8TD43 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
TRPM4Q8TD43 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
TRPM4Q8TD43 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC28.6■■■□□ 2.17
TRPM4Q8TD43 PBX2P1-201ENST00000493219 1291 ntBASIC28.6■■■□□ 2.17
TRPM4Q8TD43 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC28.6■■■□□ 2.17
TRPM4Q8TD43 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
TRPM4Q8TD43 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TRPM4Q8TD43 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC28.6■■■□□ 2.17
TRPM4Q8TD43 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
TRPM4Q8TD43 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
TRPM4Q8TD43 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.59■■■□□ 2.17
TRPM4Q8TD43 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
TRPM4Q8TD43 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
TRPM4Q8TD43 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
TRPM4Q8TD43 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC28.58■■■□□ 2.17
TRPM4Q8TD43 AC142381.2-201ENST00000566120 298 ntBASIC28.58■■■□□ 2.17
TRPM4Q8TD43 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
TRPM4Q8TD43 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
TRPM4Q8TD43 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC28.57■■■□□ 2.16
TRPM4Q8TD43 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
TRPM4Q8TD43 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
TRPM4Q8TD43 DRD5P2-201ENST00000421395 2012 ntBASIC28.56■■■□□ 2.16
TRPM4Q8TD43 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
TRPM4Q8TD43 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC28.56■■■□□ 2.16
TRPM4Q8TD43 AL031432.3-201ENST00000607698 485 ntBASIC28.56■■■□□ 2.16
TRPM4Q8TD43 AC142472.1-201ENST00000612013 1741 ntBASIC28.55■■■□□ 2.16
TRPM4Q8TD43 AF131216.4-201ENST00000638924 1588 ntBASIC28.55■■■□□ 2.16
TRPM4Q8TD43 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
TRPM4Q8TD43 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC28.55■■■□□ 2.16
TRPM4Q8TD43 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC28.55■■■□□ 2.16
TRPM4Q8TD43 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TRPM4Q8TD43 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TRPM4Q8TD43 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TRPM4Q8TD43 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC28.54■■■□□ 2.16
TRPM4Q8TD43 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC28.54■■■□□ 2.16
TRPM4Q8TD43 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC28.54■■■□□ 2.16
TRPM4Q8TD43 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC28.54■■■□□ 2.16
TRPM4Q8TD43 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TRPM4Q8TD43 LINC01003-201ENST00000564834 1764 ntBASIC28.54■■■□□ 2.16
TRPM4Q8TD43 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC28.54■■■□□ 2.16
TRPM4Q8TD43 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC28.53■■■□□ 2.16
TRPM4Q8TD43 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TRPM4Q8TD43 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TRPM4Q8TD43 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TRPM4Q8TD43 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TRPM4Q8TD43 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
TRPM4Q8TD43 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TRPM4Q8TD43 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC28.52■■■□□ 2.16
TRPM4Q8TD43 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.52■■■□□ 2.16
TRPM4Q8TD43 AC135279.3-201ENST00000610945 1311 ntBASIC28.51■■■□□ 2.15
TRPM4Q8TD43 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC28.51■■■□□ 2.15
TRPM4Q8TD43 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
TRPM4Q8TD43 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC28.51■■■□□ 2.15
TRPM4Q8TD43 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TRPM4Q8TD43 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TRPM4Q8TD43 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TRPM4Q8TD43 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC28.5■■■□□ 2.15
TRPM4Q8TD43 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC28.5■■■□□ 2.15
TRPM4Q8TD43 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
TRPM4Q8TD43 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TRPM4Q8TD43 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
TRPM4Q8TD43 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TRPM4Q8TD43 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms