Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DNAAF1Q8NEP3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DNAAF1Q8NEP3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DNAAF1Q8NEP3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
DNAAF1Q8NEP3 AC133561.1-201ENST00000568600 2415 ntBASIC20.73■□□□□ 0.91
DNAAF1Q8NEP3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.73■□□□□ 0.91
DNAAF1Q8NEP3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
DNAAF1Q8NEP3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
DNAAF1Q8NEP3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DNAAF1Q8NEP3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DNAAF1Q8NEP3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
DNAAF1Q8NEP3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAAF1Q8NEP3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAAF1Q8NEP3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAAF1Q8NEP3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
DNAAF1Q8NEP3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
DNAAF1Q8NEP3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAAF1Q8NEP3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAAF1Q8NEP3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAAF1Q8NEP3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DNAAF1Q8NEP3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DNAAF1Q8NEP3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAAF1Q8NEP3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAAF1Q8NEP3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAAF1Q8NEP3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DNAAF1Q8NEP3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAAF1Q8NEP3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.71■□□□□ 0.91
DNAAF1Q8NEP3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
DNAAF1Q8NEP3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DNAAF1Q8NEP3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.71■□□□□ 0.91
DNAAF1Q8NEP3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DNAAF1Q8NEP3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
DNAAF1Q8NEP3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.71■□□□□ 0.91
DNAAF1Q8NEP3 AC012676.1-201ENST00000574705 1949 ntBASIC20.7■□□□□ 0.91
DNAAF1Q8NEP3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNAAF1Q8NEP3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.7■□□□□ 0.9
DNAAF1Q8NEP3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNAAF1Q8NEP3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNAAF1Q8NEP3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DNAAF1Q8NEP3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNAAF1Q8NEP3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.7■□□□□ 0.9
DNAAF1Q8NEP3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNAAF1Q8NEP3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNAAF1Q8NEP3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DNAAF1Q8NEP3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
DNAAF1Q8NEP3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DNAAF1Q8NEP3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DNAAF1Q8NEP3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.69■□□□□ 0.9
DNAAF1Q8NEP3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DNAAF1Q8NEP3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DNAAF1Q8NEP3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DNAAF1Q8NEP3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
DNAAF1Q8NEP3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DNAAF1Q8NEP3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DNAAF1Q8NEP3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
DNAAF1Q8NEP3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DNAAF1Q8NEP3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.68■□□□□ 0.9
DNAAF1Q8NEP3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DNAAF1Q8NEP3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
DNAAF1Q8NEP3 SLC6A10P-202ENST00000431994 2058 ntBASIC20.68■□□□□ 0.9
DNAAF1Q8NEP3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DNAAF1Q8NEP3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DNAAF1Q8NEP3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DNAAF1Q8NEP3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DNAAF1Q8NEP3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
DNAAF1Q8NEP3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DNAAF1Q8NEP3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DNAAF1Q8NEP3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DNAAF1Q8NEP3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
DNAAF1Q8NEP3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DNAAF1Q8NEP3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DNAAF1Q8NEP3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DNAAF1Q8NEP3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DNAAF1Q8NEP3 AP003733.4-201ENST00000623785 1697 ntBASIC20.67■□□□□ 0.9
DNAAF1Q8NEP3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DNAAF1Q8NEP3 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.67■□□□□ 0.9
DNAAF1Q8NEP3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.67■□□□□ 0.9
DNAAF1Q8NEP3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DNAAF1Q8NEP3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DNAAF1Q8NEP3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DNAAF1Q8NEP3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DNAAF1Q8NEP3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
DNAAF1Q8NEP3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DNAAF1Q8NEP3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DNAAF1Q8NEP3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DNAAF1Q8NEP3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
DNAAF1Q8NEP3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
DNAAF1Q8NEP3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DNAAF1Q8NEP3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.65■□□□□ 0.9
DNAAF1Q8NEP3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DNAAF1Q8NEP3 AC097639.1-201ENST00000565519 1891 ntBASIC20.65■□□□□ 0.9
DNAAF1Q8NEP3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DNAAF1Q8NEP3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.65■□□□□ 0.9
DNAAF1Q8NEP3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DNAAF1Q8NEP3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
DNAAF1Q8NEP3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DNAAF1Q8NEP3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
DNAAF1Q8NEP3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DNAAF1Q8NEP3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
DNAAF1Q8NEP3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms