Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.85■□□□□ 0.93
LYSMD2Q8IV50 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.85■□□□□ 0.93
LYSMD2Q8IV50 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LYSMD2Q8IV50 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD2Q8IV50 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD2Q8IV50 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LYSMD2Q8IV50 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LYSMD2Q8IV50 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD2Q8IV50 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD2Q8IV50 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD2Q8IV50 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.85■□□□□ 0.93
LYSMD2Q8IV50 AC141586.4-201ENST00000624558 1573 ntBASIC20.85■□□□□ 0.93
LYSMD2Q8IV50 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LYSMD2Q8IV50 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LYSMD2Q8IV50 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LYSMD2Q8IV50 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LYSMD2Q8IV50 AC136428.2-201ENST00000563187 214 ntBASIC20.84■□□□□ 0.93
LYSMD2Q8IV50 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
LYSMD2Q8IV50 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LYSMD2Q8IV50 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
LYSMD2Q8IV50 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LYSMD2Q8IV50 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.84■□□□□ 0.93
LYSMD2Q8IV50 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.84■□□□□ 0.93
LYSMD2Q8IV50 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LYSMD2Q8IV50 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.83■□□□□ 0.93
LYSMD2Q8IV50 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.83■□□□□ 0.93
LYSMD2Q8IV50 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
LYSMD2Q8IV50 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LYSMD2Q8IV50 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.83■□□□□ 0.92
LYSMD2Q8IV50 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.83■□□□□ 0.92
LYSMD2Q8IV50 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LYSMD2Q8IV50 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LYSMD2Q8IV50 LINC00273-201ENST00000539813 1452 ntBASIC20.82■□□□□ 0.92
LYSMD2Q8IV50 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LYSMD2Q8IV50 ABCB10P4-201ENST00000566803 2184 ntBASIC20.82■□□□□ 0.92
LYSMD2Q8IV50 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LYSMD2Q8IV50 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LYSMD2Q8IV50 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LYSMD2Q8IV50 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
LYSMD2Q8IV50 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.81■□□□□ 0.92
LYSMD2Q8IV50 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD2Q8IV50 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD2Q8IV50 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD2Q8IV50 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
LYSMD2Q8IV50 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.81■□□□□ 0.92
LYSMD2Q8IV50 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD2Q8IV50 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.81■□□□□ 0.92
LYSMD2Q8IV50 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
LYSMD2Q8IV50 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD2Q8IV50 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD2Q8IV50 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD2Q8IV50 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD2Q8IV50 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD2Q8IV50 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD2Q8IV50 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD2Q8IV50 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD2Q8IV50 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD2Q8IV50 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.8■□□□□ 0.92
LYSMD2Q8IV50 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD2Q8IV50 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD2Q8IV50 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD2Q8IV50 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
LYSMD2Q8IV50 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.79■□□□□ 0.92
LYSMD2Q8IV50 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.79■□□□□ 0.92
LYSMD2Q8IV50 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD2Q8IV50 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD2Q8IV50 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD2Q8IV50 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.78■□□□□ 0.92
LYSMD2Q8IV50 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD2Q8IV50 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD2Q8IV50 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD2Q8IV50 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.78■□□□□ 0.92
LYSMD2Q8IV50 AC097358.2-201ENST00000607541 1159 ntBASIC20.78■□□□□ 0.92
LYSMD2Q8IV50 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LYSMD2Q8IV50 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.77■□□□□ 0.92
LYSMD2Q8IV50 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
LYSMD2Q8IV50 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LYSMD2Q8IV50 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LYSMD2Q8IV50 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.77■□□□□ 0.92
LYSMD2Q8IV50 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
LYSMD2Q8IV50 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LYSMD2Q8IV50 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LYSMD2Q8IV50 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
LYSMD2Q8IV50 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LYSMD2Q8IV50 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LYSMD2Q8IV50 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LYSMD2Q8IV50 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LYSMD2Q8IV50 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.76■□□□□ 0.91
LYSMD2Q8IV50 AC233723.2-201ENST00000623798 2106 ntBASIC20.75■□□□□ 0.91
LYSMD2Q8IV50 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LYSMD2Q8IV50 C1orf229-201ENST00000623686 2258 ntBASIC20.75■□□□□ 0.91
LYSMD2Q8IV50 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.75■□□□□ 0.91
LYSMD2Q8IV50 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LYSMD2Q8IV50 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LYSMD2Q8IV50 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LYSMD2Q8IV50 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LYSMD2Q8IV50 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD2Q8IV50 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LYSMD2Q8IV50 AC004812.2-201ENST00000611079 2094 ntBASIC20.74■□□□□ 0.91
LYSMD2Q8IV50 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms