Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
C12orf40Q86WS4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
C12orf40Q86WS4 AC137630.3-201ENST00000607245 391 ntBASIC24.39■■□□□ 1.49
C12orf40Q86WS4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
C12orf40Q86WS4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
C12orf40Q86WS4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.38■■□□□ 1.49
C12orf40Q86WS4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.38■■□□□ 1.49
C12orf40Q86WS4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.38■■□□□ 1.49
C12orf40Q86WS4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.38■■□□□ 1.49
C12orf40Q86WS4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
C12orf40Q86WS4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
C12orf40Q86WS4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
C12orf40Q86WS4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.37■■□□□ 1.49
C12orf40Q86WS4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
C12orf40Q86WS4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
C12orf40Q86WS4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
C12orf40Q86WS4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
C12orf40Q86WS4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
C12orf40Q86WS4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.37■■□□□ 1.49
C12orf40Q86WS4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
C12orf40Q86WS4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
C12orf40Q86WS4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
C12orf40Q86WS4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.36■■□□□ 1.49
C12orf40Q86WS4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
C12orf40Q86WS4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.36■■□□□ 1.49
C12orf40Q86WS4 MIR4281-201ENST00000580852 62 ntBASIC24.36■■□□□ 1.49
C12orf40Q86WS4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
C12orf40Q86WS4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
C12orf40Q86WS4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
C12orf40Q86WS4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.35■■□□□ 1.49
C12orf40Q86WS4 AC021242.3-201ENST00000607598 1377 ntBASIC24.35■■□□□ 1.49
C12orf40Q86WS4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.35■■□□□ 1.49
C12orf40Q86WS4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.35■■□□□ 1.49
C12orf40Q86WS4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
C12orf40Q86WS4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.34■■□□□ 1.49
C12orf40Q86WS4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
C12orf40Q86WS4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.34■■□□□ 1.49
C12orf40Q86WS4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
C12orf40Q86WS4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
C12orf40Q86WS4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.33■■□□□ 1.49
C12orf40Q86WS4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
C12orf40Q86WS4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
C12orf40Q86WS4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
C12orf40Q86WS4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.33■■□□□ 1.49
C12orf40Q86WS4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.33■■□□□ 1.49
C12orf40Q86WS4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.33■■□□□ 1.49
C12orf40Q86WS4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.33■■□□□ 1.49
C12orf40Q86WS4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
C12orf40Q86WS4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
C12orf40Q86WS4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
C12orf40Q86WS4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
C12orf40Q86WS4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
C12orf40Q86WS4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
C12orf40Q86WS4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.32■■□□□ 1.48
C12orf40Q86WS4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
C12orf40Q86WS4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.32■■□□□ 1.48
C12orf40Q86WS4 TSPY9P-201ENST00000440215 945 ntBASIC24.32■■□□□ 1.48
C12orf40Q86WS4 TSPY11P-201ENST00000442607 1045 ntBASIC24.32■■□□□ 1.48
C12orf40Q86WS4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.32■■□□□ 1.48
C12orf40Q86WS4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.32■■□□□ 1.48
C12orf40Q86WS4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
C12orf40Q86WS4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
C12orf40Q86WS4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
C12orf40Q86WS4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
C12orf40Q86WS4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.31■■□□□ 1.48
C12orf40Q86WS4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.31■■□□□ 1.48
C12orf40Q86WS4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
C12orf40Q86WS4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
C12orf40Q86WS4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
C12orf40Q86WS4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.3■■□□□ 1.48
C12orf40Q86WS4 KRT16P3-201ENST00000439127 1283 ntBASIC24.3■■□□□ 1.48
C12orf40Q86WS4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.3■■□□□ 1.48
C12orf40Q86WS4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
C12orf40Q86WS4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
C12orf40Q86WS4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
C12orf40Q86WS4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
C12orf40Q86WS4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
C12orf40Q86WS4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
C12orf40Q86WS4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
C12orf40Q86WS4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
C12orf40Q86WS4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
C12orf40Q86WS4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
C12orf40Q86WS4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
C12orf40Q86WS4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.28■■□□□ 1.48
C12orf40Q86WS4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
C12orf40Q86WS4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
C12orf40Q86WS4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
C12orf40Q86WS4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.27■■□□□ 1.48
C12orf40Q86WS4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
C12orf40Q86WS4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
C12orf40Q86WS4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
C12orf40Q86WS4 ERN1-208ENST00000606895 2068 ntBASIC24.26■■□□□ 1.47
C12orf40Q86WS4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
C12orf40Q86WS4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.26■■□□□ 1.47
C12orf40Q86WS4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
C12orf40Q86WS4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.26■■□□□ 1.47
C12orf40Q86WS4 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.26■■□□□ 1.47
C12orf40Q86WS4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
C12orf40Q86WS4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
C12orf40Q86WS4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms