Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF546Q86UE3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF546Q86UE3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ZNF546Q86UE3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF546Q86UE3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF546Q86UE3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF546Q86UE3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF546Q86UE3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF546Q86UE3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF546Q86UE3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF546Q86UE3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF546Q86UE3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF546Q86UE3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF546Q86UE3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.63■□□□□ 0.73
ZNF546Q86UE3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ZNF546Q86UE3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF546Q86UE3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF546Q86UE3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF546Q86UE3 MIR762-201ENST00000390236 83 ntBASIC19.62■□□□□ 0.73
ZNF546Q86UE3 AC136428.2-201ENST00000563187 214 ntBASIC19.62■□□□□ 0.73
ZNF546Q86UE3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.62■□□□□ 0.73
ZNF546Q86UE3 AC097358.2-201ENST00000607541 1159 ntBASIC19.62■□□□□ 0.73
ZNF546Q86UE3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF546Q86UE3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF546Q86UE3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF546Q86UE3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF546Q86UE3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF546Q86UE3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF546Q86UE3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ZNF546Q86UE3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF546Q86UE3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF546Q86UE3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ZNF546Q86UE3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF546Q86UE3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF546Q86UE3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF546Q86UE3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF546Q86UE3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF546Q86UE3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF546Q86UE3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF546Q86UE3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF546Q86UE3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF546Q86UE3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF546Q86UE3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ZNF546Q86UE3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
ZNF546Q86UE3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF546Q86UE3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF546Q86UE3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ZNF546Q86UE3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.59■□□□□ 0.73
ZNF546Q86UE3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF546Q86UE3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF546Q86UE3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
ZNF546Q86UE3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.58■□□□□ 0.73
ZNF546Q86UE3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.58■□□□□ 0.73
ZNF546Q86UE3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF546Q86UE3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF546Q86UE3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
ZNF546Q86UE3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF546Q86UE3 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.58■□□□□ 0.72
ZNF546Q86UE3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
ZNF546Q86UE3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF546Q86UE3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.57■□□□□ 0.72
ZNF546Q86UE3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF546Q86UE3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ZNF546Q86UE3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF546Q86UE3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF546Q86UE3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF546Q86UE3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.57■□□□□ 0.72
ZNF546Q86UE3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF546Q86UE3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF546Q86UE3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF546Q86UE3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF546Q86UE3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ZNF546Q86UE3 PKD1P6-201ENST00000343738 4769 ntBASIC19.56■□□□□ 0.72
ZNF546Q86UE3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF546Q86UE3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ZNF546Q86UE3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF546Q86UE3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNF546Q86UE3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF546Q86UE3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF546Q86UE3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
ZNF546Q86UE3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF546Q86UE3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF546Q86UE3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.55■□□□□ 0.72
ZNF546Q86UE3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.55■□□□□ 0.72
ZNF546Q86UE3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF546Q86UE3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF546Q86UE3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNF546Q86UE3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF546Q86UE3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF546Q86UE3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF546Q86UE3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF546Q86UE3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF546Q86UE3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ZNF546Q86UE3 LINC00565-201ENST00000562710 2331 ntBASIC19.54■□□□□ 0.72
ZNF546Q86UE3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF546Q86UE3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF546Q86UE3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF546Q86UE3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF546Q86UE3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ZNF546Q86UE3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms