Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRFN4Q6PJG9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRFN4Q6PJG9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRFN4Q6PJG9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.21■□□□□ 0.99
LRFN4Q6PJG9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.21■□□□□ 0.99
LRFN4Q6PJG9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.21■□□□□ 0.99
LRFN4Q6PJG9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LRFN4Q6PJG9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.21■□□□□ 0.99
LRFN4Q6PJG9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.21■□□□□ 0.99
LRFN4Q6PJG9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRFN4Q6PJG9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRFN4Q6PJG9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LRFN4Q6PJG9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.21■□□□□ 0.99
LRFN4Q6PJG9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LRFN4Q6PJG9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRFN4Q6PJG9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
LRFN4Q6PJG9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRFN4Q6PJG9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.2■□□□□ 0.98
LRFN4Q6PJG9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRFN4Q6PJG9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRFN4Q6PJG9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
LRFN4Q6PJG9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.2■□□□□ 0.98
LRFN4Q6PJG9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRFN4Q6PJG9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.2■□□□□ 0.98
LRFN4Q6PJG9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.2■□□□□ 0.98
LRFN4Q6PJG9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRFN4Q6PJG9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.18■□□□□ 0.98
LRFN4Q6PJG9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRFN4Q6PJG9 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.18■□□□□ 0.98
LRFN4Q6PJG9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRFN4Q6PJG9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRFN4Q6PJG9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRFN4Q6PJG9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
LRFN4Q6PJG9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
LRFN4Q6PJG9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRFN4Q6PJG9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRFN4Q6PJG9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRFN4Q6PJG9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRFN4Q6PJG9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRFN4Q6PJG9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.17■□□□□ 0.98
LRFN4Q6PJG9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRFN4Q6PJG9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRFN4Q6PJG9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.16■□□□□ 0.98
LRFN4Q6PJG9 AC097639.1-201ENST00000565519 1891 ntBASIC21.16■□□□□ 0.98
LRFN4Q6PJG9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRFN4Q6PJG9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRFN4Q6PJG9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRFN4Q6PJG9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
LRFN4Q6PJG9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRFN4Q6PJG9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRFN4Q6PJG9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.15■□□□□ 0.98
LRFN4Q6PJG9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LRFN4Q6PJG9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRFN4Q6PJG9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRFN4Q6PJG9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRFN4Q6PJG9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.15■□□□□ 0.98
LRFN4Q6PJG9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRFN4Q6PJG9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.14■□□□□ 0.97
LRFN4Q6PJG9 U85056.1-201ENST00000616429 682 ntBASIC21.14■□□□□ 0.97
LRFN4Q6PJG9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
LRFN4Q6PJG9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRFN4Q6PJG9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN4Q6PJG9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN4Q6PJG9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN4Q6PJG9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN4Q6PJG9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.13■□□□□ 0.97
LRFN4Q6PJG9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN4Q6PJG9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN4Q6PJG9 AL592293.1-201ENST00000502889 1188 ntBASIC21.13■□□□□ 0.97
LRFN4Q6PJG9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN4Q6PJG9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.13■□□□□ 0.97
LRFN4Q6PJG9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN4Q6PJG9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN4Q6PJG9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN4Q6PJG9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN4Q6PJG9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN4Q6PJG9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
LRFN4Q6PJG9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN4Q6PJG9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN4Q6PJG9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN4Q6PJG9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN4Q6PJG9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.12■□□□□ 0.97
LRFN4Q6PJG9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
LRFN4Q6PJG9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN4Q6PJG9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN4Q6PJG9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN4Q6PJG9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.11■□□□□ 0.97
LRFN4Q6PJG9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN4Q6PJG9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN4Q6PJG9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
LRFN4Q6PJG9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN4Q6PJG9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN4Q6PJG9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
LRFN4Q6PJG9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.1■□□□□ 0.97
LRFN4Q6PJG9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
LRFN4Q6PJG9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN4Q6PJG9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LRFN4Q6PJG9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN4Q6PJG9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN4Q6PJG9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms