Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
USPL1Q5W0Q7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
USPL1Q5W0Q7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
USPL1Q5W0Q7 AL136116.3-201ENST00000402907 1138 ntBASIC30.38■■■□□ 2.45
USPL1Q5W0Q7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
USPL1Q5W0Q7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
USPL1Q5W0Q7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
USPL1Q5W0Q7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
USPL1Q5W0Q7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
USPL1Q5W0Q7 AC142472.1-201ENST00000612013 1741 ntBASIC30.37■■■□□ 2.45
USPL1Q5W0Q7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
USPL1Q5W0Q7 AL117332.1-201ENST00000622628 974 ntBASIC30.37■■■□□ 2.45
USPL1Q5W0Q7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
USPL1Q5W0Q7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
USPL1Q5W0Q7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
USPL1Q5W0Q7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
USPL1Q5W0Q7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
USPL1Q5W0Q7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
USPL1Q5W0Q7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
USPL1Q5W0Q7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
USPL1Q5W0Q7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
USPL1Q5W0Q7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
USPL1Q5W0Q7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC30.35■■■□□ 2.45
USPL1Q5W0Q7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30.35■■■□□ 2.45
USPL1Q5W0Q7 AC010997.5-201ENST00000609182 354 ntBASIC30.35■■■□□ 2.45
USPL1Q5W0Q7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
USPL1Q5W0Q7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
USPL1Q5W0Q7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.34■■■□□ 2.45
USPL1Q5W0Q7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC30.34■■■□□ 2.45
USPL1Q5W0Q7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.34■■■□□ 2.45
USPL1Q5W0Q7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
USPL1Q5W0Q7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
USPL1Q5W0Q7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC30.33■■■□□ 2.45
USPL1Q5W0Q7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC30.33■■■□□ 2.45
USPL1Q5W0Q7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
USPL1Q5W0Q7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
USPL1Q5W0Q7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
USPL1Q5W0Q7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
USPL1Q5W0Q7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC30.32■■■□□ 2.44
USPL1Q5W0Q7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC30.32■■■□□ 2.44
USPL1Q5W0Q7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC30.31■■■□□ 2.44
USPL1Q5W0Q7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
USPL1Q5W0Q7 MIR3621-201ENST00000580529 85 ntBASIC30.31■■■□□ 2.44
USPL1Q5W0Q7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
USPL1Q5W0Q7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
USPL1Q5W0Q7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.3■■■□□ 2.44
USPL1Q5W0Q7 AC110285.6-201ENST00000617652 491 ntBASIC30.3■■■□□ 2.44
USPL1Q5W0Q7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
USPL1Q5W0Q7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.29■■■□□ 2.44
USPL1Q5W0Q7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
USPL1Q5W0Q7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC30.29■■■□□ 2.44
USPL1Q5W0Q7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.29■■■□□ 2.44
USPL1Q5W0Q7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC30.29■■■□□ 2.44
USPL1Q5W0Q7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
USPL1Q5W0Q7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.28■■■□□ 2.44
USPL1Q5W0Q7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.28■■■□□ 2.44
USPL1Q5W0Q7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
USPL1Q5W0Q7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC30.28■■■□□ 2.44
USPL1Q5W0Q7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC30.28■■■□□ 2.44
USPL1Q5W0Q7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC30.28■■■□□ 2.44
USPL1Q5W0Q7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
USPL1Q5W0Q7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC30.28■■■□□ 2.44
USPL1Q5W0Q7 MIR6724-1-201ENST00000616420 92 ntBASIC30.28■■■□□ 2.44
USPL1Q5W0Q7 MIR6724-2-201ENST00000616483 92 ntBASIC30.28■■■□□ 2.44
USPL1Q5W0Q7 MIR6724-4-201ENST00000617390 92 ntBASIC30.28■■■□□ 2.44
USPL1Q5W0Q7 MIR6724-3-201ENST00000622482 92 ntBASIC30.28■■■□□ 2.44
USPL1Q5W0Q7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
USPL1Q5W0Q7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.27■■■□□ 2.44
USPL1Q5W0Q7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.27■■■□□ 2.44
USPL1Q5W0Q7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
USPL1Q5W0Q7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
USPL1Q5W0Q7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
USPL1Q5W0Q7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
USPL1Q5W0Q7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
USPL1Q5W0Q7 MTDHP2-201ENST00000601468 714 ntBASIC30.26■■■□□ 2.43
USPL1Q5W0Q7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
USPL1Q5W0Q7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
USPL1Q5W0Q7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.26■■■□□ 2.43
USPL1Q5W0Q7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
USPL1Q5W0Q7 MIR4466-201ENST00000606121 54 ntBASIC30.25■■■□□ 2.43
USPL1Q5W0Q7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
USPL1Q5W0Q7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.25■■■□□ 2.43
USPL1Q5W0Q7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC30.25■■■□□ 2.43
USPL1Q5W0Q7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
USPL1Q5W0Q7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
USPL1Q5W0Q7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC30.24■■■□□ 2.43
USPL1Q5W0Q7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
USPL1Q5W0Q7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.23■■■□□ 2.43
USPL1Q5W0Q7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
USPL1Q5W0Q7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
USPL1Q5W0Q7 GAK-223ENST00000628912 497 ntTSL 5 BASIC30.23■■■□□ 2.43
USPL1Q5W0Q7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.23■■■□□ 2.43
USPL1Q5W0Q7 AP004609.3-201ENST00000610705 1884 ntBASIC30.23■■■□□ 2.43
USPL1Q5W0Q7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
USPL1Q5W0Q7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
USPL1Q5W0Q7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
USPL1Q5W0Q7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.22■■■□□ 2.43
USPL1Q5W0Q7 AC096631.2-201ENST00000436136 790 ntBASIC30.22■■■□□ 2.43
USPL1Q5W0Q7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
USPL1Q5W0Q7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms