Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 AL121749.1-202ENST00000609313 2153 ntBASIC20.25■□□□□ 0.83
ARFGEF3Q5TH69 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARFGEF3Q5TH69 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.25■□□□□ 0.83
ARFGEF3Q5TH69 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.25■□□□□ 0.83
ARFGEF3Q5TH69 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ARFGEF3Q5TH69 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.25■□□□□ 0.83
ARFGEF3Q5TH69 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.25■□□□□ 0.83
ARFGEF3Q5TH69 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ARFGEF3Q5TH69 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.25■□□□□ 0.83
ARFGEF3Q5TH69 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARFGEF3Q5TH69 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.25■□□□□ 0.83
ARFGEF3Q5TH69 AC239859.2-201ENST00000444165 318 ntBASIC20.25■□□□□ 0.83
ARFGEF3Q5TH69 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.25■□□□□ 0.83
ARFGEF3Q5TH69 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ARFGEF3Q5TH69 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ARFGEF3Q5TH69 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ARFGEF3Q5TH69 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARFGEF3Q5TH69 AC096887.2-201ENST00000623443 1957 ntBASIC20.24■□□□□ 0.83
ARFGEF3Q5TH69 BX664725.1-201ENST00000438252 379 ntBASIC20.24■□□□□ 0.83
ARFGEF3Q5TH69 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.24■□□□□ 0.83
ARFGEF3Q5TH69 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARFGEF3Q5TH69 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARFGEF3Q5TH69 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARFGEF3Q5TH69 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARFGEF3Q5TH69 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARFGEF3Q5TH69 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.23■□□□□ 0.83
ARFGEF3Q5TH69 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.23■□□□□ 0.83
ARFGEF3Q5TH69 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.23■□□□□ 0.83
ARFGEF3Q5TH69 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.23■□□□□ 0.83
ARFGEF3Q5TH69 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ARFGEF3Q5TH69 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.22■□□□□ 0.83
ARFGEF3Q5TH69 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGEF3Q5TH69 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGEF3Q5TH69 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.22■□□□□ 0.83
ARFGEF3Q5TH69 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.22■□□□□ 0.83
ARFGEF3Q5TH69 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGEF3Q5TH69 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGEF3Q5TH69 AL592295.1-201ENST00000400984 884 ntBASIC20.21■□□□□ 0.83
ARFGEF3Q5TH69 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ARFGEF3Q5TH69 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.21■□□□□ 0.83
ARFGEF3Q5TH69 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGEF3Q5TH69 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ARFGEF3Q5TH69 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ARFGEF3Q5TH69 MIR4787-201ENST00000607364 84 ntBASIC20.2■□□□□ 0.82
ARFGEF3Q5TH69 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGEF3Q5TH69 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGEF3Q5TH69 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGEF3Q5TH69 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
ARFGEF3Q5TH69 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGEF3Q5TH69 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGEF3Q5TH69 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.19■□□□□ 0.82
ARFGEF3Q5TH69 AC137630.3-201ENST00000607245 391 ntBASIC20.19■□□□□ 0.82
ARFGEF3Q5TH69 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ARFGEF3Q5TH69 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGEF3Q5TH69 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGEF3Q5TH69 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARFGEF3Q5TH69 KRT125P-201ENST00000546827 989 ntBASIC20.18■□□□□ 0.82
ARFGEF3Q5TH69 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARFGEF3Q5TH69 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARFGEF3Q5TH69 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ARFGEF3Q5TH69 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.18■□□□□ 0.82
ARFGEF3Q5TH69 AC120024.1-201ENST00000562672 995 ntBASIC20.18■□□□□ 0.82
ARFGEF3Q5TH69 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ARFGEF3Q5TH69 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARFGEF3Q5TH69 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARFGEF3Q5TH69 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
ARFGEF3Q5TH69 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARFGEF3Q5TH69 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARFGEF3Q5TH69 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.17■□□□□ 0.82
ARFGEF3Q5TH69 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARFGEF3Q5TH69 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.17■□□□□ 0.82
ARFGEF3Q5TH69 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
ARFGEF3Q5TH69 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARFGEF3Q5TH69 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARFGEF3Q5TH69 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARFGEF3Q5TH69 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.17■□□□□ 0.82
ARFGEF3Q5TH69 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARFGEF3Q5TH69 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARFGEF3Q5TH69 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARFGEF3Q5TH69 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARFGEF3Q5TH69 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.16■□□□□ 0.82
ARFGEF3Q5TH69 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARFGEF3Q5TH69 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ARFGEF3Q5TH69 THA1P-201ENST00000590384 1145 ntBASIC20.15■□□□□ 0.82
ARFGEF3Q5TH69 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ARFGEF3Q5TH69 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.15■□□□□ 0.82
ARFGEF3Q5TH69 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.15■□□□□ 0.82
ARFGEF3Q5TH69 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARFGEF3Q5TH69 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARFGEF3Q5TH69 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ARFGEF3Q5TH69 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.15■□□□□ 0.82
ARFGEF3Q5TH69 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.15■□□□□ 0.82
ARFGEF3Q5TH69 AC097639.1-201ENST00000565519 1891 ntBASIC20.15■□□□□ 0.82
ARFGEF3Q5TH69 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.14■□□□□ 0.82
ARFGEF3Q5TH69 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
ARFGEF3Q5TH69 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.14■□□□□ 0.82
ARFGEF3Q5TH69 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
ARFGEF3Q5TH69 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.14■□□□□ 0.81
ARFGEF3Q5TH69 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ARFGEF3Q5TH69 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms