Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC39.73■■■■□ 3.95
SNAPC4Q5SXM2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC39.73■■■■□ 3.95
SNAPC4Q5SXM2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC39.73■■■■□ 3.95
SNAPC4Q5SXM2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC39.72■■■■□ 3.95
SNAPC4Q5SXM2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC39.72■■■■□ 3.95
SNAPC4Q5SXM2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC39.72■■■■□ 3.95
SNAPC4Q5SXM2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
SNAPC4Q5SXM2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC39.72■■■■□ 3.95
SNAPC4Q5SXM2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC39.72■■■■□ 3.95
SNAPC4Q5SXM2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC39.72■■■■□ 3.95
SNAPC4Q5SXM2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC39.7■■■■□ 3.95
SNAPC4Q5SXM2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC39.7■■■■□ 3.95
SNAPC4Q5SXM2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC39.7■■■■□ 3.95
SNAPC4Q5SXM2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC39.7■■■■□ 3.95
SNAPC4Q5SXM2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC39.69■■■■□ 3.94
SNAPC4Q5SXM2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
SNAPC4Q5SXM2 GAK-223ENST00000628912 497 ntTSL 5 BASIC39.68■■■■□ 3.94
SNAPC4Q5SXM2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC39.68■■■■□ 3.94
SNAPC4Q5SXM2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC39.68■■■■□ 3.94
SNAPC4Q5SXM2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
SNAPC4Q5SXM2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC39.68■■■■□ 3.94
SNAPC4Q5SXM2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC39.68■■■■□ 3.94
SNAPC4Q5SXM2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC39.68■■■■□ 3.94
SNAPC4Q5SXM2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
SNAPC4Q5SXM2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC39.67■■■■□ 3.94
SNAPC4Q5SXM2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC39.67■■■■□ 3.94
SNAPC4Q5SXM2 ANKRD20A6P-201ENST00000618763 204 ntBASIC39.67■■■■□ 3.94
SNAPC4Q5SXM2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
SNAPC4Q5SXM2 AL449106.1-201ENST00000608517 1980 ntBASIC39.66■■■■□ 3.94
SNAPC4Q5SXM2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC39.66■■■■□ 3.94
SNAPC4Q5SXM2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC39.66■■■■□ 3.94
SNAPC4Q5SXM2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC39.66■■■■□ 3.94
SNAPC4Q5SXM2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC39.66■■■■□ 3.94
SNAPC4Q5SXM2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC39.66■■■■□ 3.94
SNAPC4Q5SXM2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC39.65■■■■□ 3.94
SNAPC4Q5SXM2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC39.64■■■■□ 3.94
SNAPC4Q5SXM2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
SNAPC4Q5SXM2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC39.64■■■■□ 3.94
SNAPC4Q5SXM2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
SNAPC4Q5SXM2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC39.63■■■■□ 3.94
SNAPC4Q5SXM2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC39.63■■■■□ 3.93
SNAPC4Q5SXM2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC39.63■■■■□ 3.93
SNAPC4Q5SXM2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC39.62■■■■□ 3.93
SNAPC4Q5SXM2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC39.62■■■■□ 3.93
SNAPC4Q5SXM2 AL136162.1-201ENST00000607711 1078 ntBASIC39.62■■■■□ 3.93
SNAPC4Q5SXM2 UNC93B3-201ENST00000308076 687 ntBASIC39.62■■■■□ 3.93
SNAPC4Q5SXM2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC39.61■■■■□ 3.93
SNAPC4Q5SXM2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC39.61■■■■□ 3.93
SNAPC4Q5SXM2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
SNAPC4Q5SXM2 AC105265.2-201ENST00000467189 838 ntBASIC39.61■■■■□ 3.93
SNAPC4Q5SXM2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC39.6■■■■□ 3.93
SNAPC4Q5SXM2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC39.6■■■■□ 3.93
SNAPC4Q5SXM2 AF131216.4-201ENST00000638924 1588 ntBASIC39.59■■■■□ 3.93
SNAPC4Q5SXM2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC39.59■■■■□ 3.93
SNAPC4Q5SXM2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC39.59■■■■□ 3.93
SNAPC4Q5SXM2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC39.59■■■■□ 3.93
SNAPC4Q5SXM2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC39.59■■■■□ 3.93
SNAPC4Q5SXM2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC39.58■■■■□ 3.93
SNAPC4Q5SXM2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
SNAPC4Q5SXM2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC39.57■■■■□ 3.93
SNAPC4Q5SXM2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.92
SNAPC4Q5SXM2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC39.56■■■■□ 3.92
SNAPC4Q5SXM2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC39.56■■■■□ 3.92
SNAPC4Q5SXM2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC39.56■■■■□ 3.92
SNAPC4Q5SXM2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC39.56■■■■□ 3.92
SNAPC4Q5SXM2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC39.56■■■■□ 3.92
SNAPC4Q5SXM2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC39.55■■■■□ 3.92
SNAPC4Q5SXM2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC39.55■■■■□ 3.92
SNAPC4Q5SXM2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC39.55■■■■□ 3.92
SNAPC4Q5SXM2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC39.55■■■■□ 3.92
SNAPC4Q5SXM2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC39.55■■■■□ 3.92
SNAPC4Q5SXM2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
SNAPC4Q5SXM2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC39.54■■■■□ 3.92
SNAPC4Q5SXM2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
SNAPC4Q5SXM2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
SNAPC4Q5SXM2 EDA-201ENST00000338901 1233 ntBASIC39.53■■■■□ 3.92
SNAPC4Q5SXM2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC39.52■■■■□ 3.92
SNAPC4Q5SXM2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC39.52■■■■□ 3.92
SNAPC4Q5SXM2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC39.52■■■■□ 3.92
SNAPC4Q5SXM2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC39.52■■■■□ 3.92
SNAPC4Q5SXM2 AC024257.2-201ENST00000549699 147 ntBASIC39.51■■■■□ 3.92
SNAPC4Q5SXM2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC39.51■■■■□ 3.92
SNAPC4Q5SXM2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC39.51■■■■□ 3.92
SNAPC4Q5SXM2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC39.5■■■■□ 3.91
SNAPC4Q5SXM2 MIR6821-201ENST00000617625 74 ntBASIC39.5■■■■□ 3.91
SNAPC4Q5SXM2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC39.5■■■■□ 3.91
SNAPC4Q5SXM2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
SNAPC4Q5SXM2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
SNAPC4Q5SXM2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC39.49■■■■□ 3.91
SNAPC4Q5SXM2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC39.49■■■■□ 3.91
SNAPC4Q5SXM2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
SNAPC4Q5SXM2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC39.49■■■■□ 3.91
SNAPC4Q5SXM2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC39.49■■■■□ 3.91
SNAPC4Q5SXM2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC39.49■■■■□ 3.91
SNAPC4Q5SXM2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC39.49■■■■□ 3.91
SNAPC4Q5SXM2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC39.49■■■■□ 3.91
SNAPC4Q5SXM2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC39.49■■■■□ 3.91
SNAPC4Q5SXM2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC39.48■■■■□ 3.91
SNAPC4Q5SXM2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC39.48■■■■□ 3.91
SNAPC4Q5SXM2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC39.48■■■■□ 3.91
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms