Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01559Q495D7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC01559Q495D7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01559Q495D7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01559Q495D7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LINC01559Q495D7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.55■□□□□ 0.4
LINC01559Q495D7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01559Q495D7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.55■□□□□ 0.4
LINC01559Q495D7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01559Q495D7 AC079834.2-201ENST00000609776 1949 ntBASIC17.55■□□□□ 0.4
LINC01559Q495D7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LINC01559Q495D7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01559Q495D7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01559Q495D7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.54■□□□□ 0.4
LINC01559Q495D7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01559Q495D7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01559Q495D7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.54■□□□□ 0.4
LINC01559Q495D7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC01559Q495D7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01559Q495D7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01559Q495D7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01559Q495D7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC01559Q495D7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01559Q495D7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01559Q495D7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.53■□□□□ 0.4
LINC01559Q495D7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LINC01559Q495D7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01559Q495D7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.53■□□□□ 0.4
LINC01559Q495D7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01559Q495D7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01559Q495D7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.53■□□□□ 0.4
LINC01559Q495D7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01559Q495D7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01559Q495D7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01559Q495D7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LINC01559Q495D7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01559Q495D7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01559Q495D7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01559Q495D7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01559Q495D7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LINC01559Q495D7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01559Q495D7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.52■□□□□ 0.4
LINC01559Q495D7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01559Q495D7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01559Q495D7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
LINC01559Q495D7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.52■□□□□ 0.4
LINC01559Q495D7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.52■□□□□ 0.4
LINC01559Q495D7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LINC01559Q495D7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01559Q495D7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LINC01559Q495D7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LINC01559Q495D7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LINC01559Q495D7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LINC01559Q495D7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.51■□□□□ 0.39
LINC01559Q495D7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
LINC01559Q495D7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01559Q495D7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01559Q495D7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01559Q495D7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01559Q495D7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01559Q495D7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01559Q495D7 HLA-V-202ENST00000446817 847 ntBASIC17.51■□□□□ 0.39
LINC01559Q495D7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.51■□□□□ 0.39
LINC01559Q495D7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01559Q495D7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LINC01559Q495D7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.51■□□□□ 0.39
LINC01559Q495D7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01559Q495D7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01559Q495D7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.5■□□□□ 0.39
LINC01559Q495D7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01559Q495D7 AC133561.1-201ENST00000568600 2415 ntBASIC17.5■□□□□ 0.39
LINC01559Q495D7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01559Q495D7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.5■□□□□ 0.39
LINC01559Q495D7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01559Q495D7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01559Q495D7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01559Q495D7 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.5■□□□□ 0.39
LINC01559Q495D7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01559Q495D7 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.5■□□□□ 0.39
LINC01559Q495D7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01559Q495D7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01559Q495D7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01559Q495D7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.5■□□□□ 0.39
LINC01559Q495D7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01559Q495D7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LINC01559Q495D7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.49■□□□□ 0.39
LINC01559Q495D7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.49■□□□□ 0.39
LINC01559Q495D7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01559Q495D7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01559Q495D7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LINC01559Q495D7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01559Q495D7 AC126177.7-201ENST00000547904 679 ntBASIC17.49■□□□□ 0.39
LINC01559Q495D7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01559Q495D7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01559Q495D7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01559Q495D7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01559Q495D7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01559Q495D7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
LINC01559Q495D7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01559Q495D7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms