Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.79■□□□□ 0.92
NKX6-1P78426 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.78■□□□□ 0.92
NKX6-1P78426 AC008406.3-201ENST00000620001 1374 ntBASIC20.78■□□□□ 0.92
NKX6-1P78426 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
NKX6-1P78426 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.78■□□□□ 0.92
NKX6-1P78426 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKX6-1P78426 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NKX6-1P78426 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKX6-1P78426 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.78■□□□□ 0.92
NKX6-1P78426 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX6-1P78426 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX6-1P78426 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NKX6-1P78426 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX6-1P78426 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX6-1P78426 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NKX6-1P78426 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX6-1P78426 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX6-1P78426 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.77■□□□□ 0.92
NKX6-1P78426 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX6-1P78426 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.77■□□□□ 0.92
NKX6-1P78426 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX6-1P78426 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX6-1P78426 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.77■□□□□ 0.92
NKX6-1P78426 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX6-1P78426 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
NKX6-1P78426 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
NKX6-1P78426 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.76■□□□□ 0.91
NKX6-1P78426 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NKX6-1P78426 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NKX6-1P78426 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKX6-1P78426 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKX6-1P78426 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKX6-1P78426 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
NKX6-1P78426 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKX6-1P78426 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.75■□□□□ 0.91
NKX6-1P78426 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.75■□□□□ 0.91
NKX6-1P78426 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.74■□□□□ 0.91
NKX6-1P78426 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.74■□□□□ 0.91
NKX6-1P78426 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NKX6-1P78426 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
NKX6-1P78426 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.74■□□□□ 0.91
NKX6-1P78426 AC019171.1-201ENST00000601251 1056 ntBASIC20.74■□□□□ 0.91
NKX6-1P78426 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NKX6-1P78426 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NKX6-1P78426 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.73■□□□□ 0.91
NKX6-1P78426 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NKX6-1P78426 Z92544.1-202ENST00000571933 1220 ntBASIC20.73■□□□□ 0.91
NKX6-1P78426 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.73■□□□□ 0.91
NKX6-1P78426 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX6-1P78426 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX6-1P78426 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.73■□□□□ 0.91
NKX6-1P78426 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX6-1P78426 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX6-1P78426 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.73■□□□□ 0.91
NKX6-1P78426 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NKX6-1P78426 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NKX6-1P78426 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.72■□□□□ 0.91
NKX6-1P78426 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.72■□□□□ 0.91
NKX6-1P78426 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.72■□□□□ 0.91
NKX6-1P78426 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NKX6-1P78426 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NKX6-1P78426 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NKX6-1P78426 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NKX6-1P78426 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NKX6-1P78426 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NKX6-1P78426 KRT18P10-201ENST00000388836 1287 ntBASIC20.71■□□□□ 0.91
NKX6-1P78426 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NKX6-1P78426 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NKX6-1P78426 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NKX6-1P78426 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.71■□□□□ 0.91
NKX6-1P78426 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.71■□□□□ 0.91
NKX6-1P78426 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NKX6-1P78426 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NKX6-1P78426 AC087393.1-201ENST00000582896 145 ntBASIC20.7■□□□□ 0.9
NKX6-1P78426 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NKX6-1P78426 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.7■□□□□ 0.9
NKX6-1P78426 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKX6-1P78426 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NKX6-1P78426 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NKX6-1P78426 RPS2P7-201ENST00000447334 885 ntBASIC20.69■□□□□ 0.9
NKX6-1P78426 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKX6-1P78426 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.69■□□□□ 0.9
NKX6-1P78426 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.69■□□□□ 0.9
NKX6-1P78426 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NKX6-1P78426 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.68■□□□□ 0.9
NKX6-1P78426 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX6-1P78426 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX6-1P78426 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.68■□□□□ 0.9
NKX6-1P78426 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.68■□□□□ 0.9
NKX6-1P78426 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX6-1P78426 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX6-1P78426 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.67■□□□□ 0.9
NKX6-1P78426 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.67■□□□□ 0.9
NKX6-1P78426 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.67■□□□□ 0.9
NKX6-1P78426 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NKX6-1P78426 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NKX6-1P78426 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.66■□□□□ 0.9
NKX6-1P78426 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NKX6-1P78426 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.66■□□□□ 0.9
NKX6-1P78426 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms