Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61BP60468 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61BP60468 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC12.78□□□□□ -0.36
SEC61BP60468 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SEC61BP60468 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SEC61BP60468 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SEC61BP60468 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
SEC61BP60468 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC12.77□□□□□ -0.36
SEC61BP60468 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61BP60468 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC12.77□□□□□ -0.37
SEC61BP60468 UNC93B8-201ENST00000511903 705 ntBASIC12.77□□□□□ -0.37
SEC61BP60468 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SEC61BP60468 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
SEC61BP60468 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61BP60468 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC12.77□□□□□ -0.37
SEC61BP60468 AC092028.1-203ENST00000608262 953 ntBASIC12.77□□□□□ -0.37
SEC61BP60468 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC12.77□□□□□ -0.37
SEC61BP60468 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC12.77□□□□□ -0.37
SEC61BP60468 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61BP60468 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC12.77□□□□□ -0.37
SEC61BP60468 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC12.77□□□□□ -0.37
SEC61BP60468 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61BP60468 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61BP60468 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC12.76□□□□□ -0.37
SEC61BP60468 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC12.76□□□□□ -0.37
SEC61BP60468 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC12.76□□□□□ -0.37
SEC61BP60468 SSSCA1-AS1-201ENST00000567594 614 ntBASIC12.76□□□□□ -0.37
SEC61BP60468 MIR4281-201ENST00000580852 62 ntBASIC12.76□□□□□ -0.37
SEC61BP60468 MTDHP2-201ENST00000601468 714 ntBASIC12.76□□□□□ -0.37
SEC61BP60468 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SEC61BP60468 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
SEC61BP60468 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC12.76□□□□□ -0.37
SEC61BP60468 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61BP60468 SNAI3-AS1-204ENST00000567997 2048 ntBASIC12.76□□□□□ -0.37
SEC61BP60468 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC12.76□□□□□ -0.37
SEC61BP60468 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61BP60468 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61BP60468 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61BP60468 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SEC61BP60468 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC12.75□□□□□ -0.37
SEC61BP60468 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC12.75□□□□□ -0.37
SEC61BP60468 PEMT-206ENST00000435340 960 ntTSL 5 BASIC12.75□□□□□ -0.37
SEC61BP60468 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC12.75□□□□□ -0.37
SEC61BP60468 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61BP60468 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SEC61BP60468 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC12.75□□□□□ -0.37
SEC61BP60468 SHF-208ENST00000560734 1731 ntTSL 3 BASIC12.75□□□□□ -0.37
SEC61BP60468 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61BP60468 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC12.75□□□□□ -0.37
SEC61BP60468 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC12.75□□□□□ -0.37
SEC61BP60468 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SEC61BP60468 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SEC61BP60468 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC12.74□□□□□ -0.37
SEC61BP60468 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61BP60468 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61BP60468 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61BP60468 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61BP60468 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SEC61BP60468 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61BP60468 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61BP60468 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC12.74□□□□□ -0.37
SEC61BP60468 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC12.74□□□□□ -0.37
SEC61BP60468 AC010997.5-201ENST00000609182 354 ntBASIC12.74□□□□□ -0.37
SEC61BP60468 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC12.74□□□□□ -0.37
SEC61BP60468 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC12.74□□□□□ -0.37
SEC61BP60468 RALB-208ENST00000631312 311 ntTSL 5 BASIC12.74□□□□□ -0.37
SEC61BP60468 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC61BP60468 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
SEC61BP60468 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
SEC61BP60468 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SEC61BP60468 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61BP60468 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61BP60468 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61BP60468 GAK-223ENST00000628912 497 ntTSL 5 BASIC12.73□□□□□ -0.37
SEC61BP60468 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61BP60468 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61BP60468 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61BP60468 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61BP60468 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC12.72□□□□□ -0.37
SEC61BP60468 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61BP60468 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC12.72□□□□□ -0.37
SEC61BP60468 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC12.72□□□□□ -0.37
SEC61BP60468 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61BP60468 LSM7-203ENST00000585409 512 ntTSL 2 BASIC12.72□□□□□ -0.37
SEC61BP60468 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SEC61BP60468 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61BP60468 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61BP60468 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.71□□□□□ -0.37
SEC61BP60468 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61BP60468 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61BP60468 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61BP60468 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61BP60468 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SEC61BP60468 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC12.71□□□□□ -0.37
SEC61BP60468 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC12.71□□□□□ -0.37
SEC61BP60468 SRR-208ENST00000576848 588 ntTSL 4 BASIC12.71□□□□□ -0.37
SEC61BP60468 AL356740.2-201ENST00000601559 647 ntBASIC12.71□□□□□ -0.37
SEC61BP60468 MIR6724-1-201ENST00000616420 92 ntBASIC12.71□□□□□ -0.37
SEC61BP60468 MIR6724-2-201ENST00000616483 92 ntBASIC12.71□□□□□ -0.37
SEC61BP60468 MIR6724-4-201ENST00000617390 92 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms