Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CX3CR1P49238 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CX3CR1P49238 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.78■□□□□ 0.92
CX3CR1P49238 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CX3CR1P49238 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CX3CR1P49238 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CX3CR1P49238 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.78■□□□□ 0.92
CX3CR1P49238 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CX3CR1P49238 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CX3CR1P49238 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CX3CR1P49238 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.77■□□□□ 0.92
CX3CR1P49238 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CX3CR1P49238 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CX3CR1P49238 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.77■□□□□ 0.92
CX3CR1P49238 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CX3CR1P49238 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CX3CR1P49238 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CX3CR1P49238 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CX3CR1P49238 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CX3CR1P49238 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.77■□□□□ 0.91
CX3CR1P49238 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.77■□□□□ 0.91
CX3CR1P49238 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CX3CR1P49238 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CX3CR1P49238 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CX3CR1P49238 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CX3CR1P49238 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CX3CR1P49238 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CX3CR1P49238 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CX3CR1P49238 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CX3CR1P49238 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CX3CR1P49238 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.75■□□□□ 0.91
CX3CR1P49238 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CX3CR1P49238 SLC6A10P-202ENST00000431994 2058 ntBASIC20.74■□□□□ 0.91
CX3CR1P49238 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CX3CR1P49238 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CX3CR1P49238 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CX3CR1P49238 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CX3CR1P49238 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CX3CR1P49238 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CX3CR1P49238 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CX3CR1P49238 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CX3CR1P49238 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CX3CR1P49238 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.73■□□□□ 0.91
CX3CR1P49238 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CX3CR1P49238 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CX3CR1P49238 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CX3CR1P49238 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CX3CR1P49238 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CX3CR1P49238 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CX3CR1P49238 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.72■□□□□ 0.91
CX3CR1P49238 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CX3CR1P49238 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.72■□□□□ 0.91
CX3CR1P49238 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.72■□□□□ 0.91
CX3CR1P49238 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CX3CR1P49238 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
CX3CR1P49238 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CX3CR1P49238 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CX3CR1P49238 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CX3CR1P49238 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CX3CR1P49238 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CX3CR1P49238 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.71■□□□□ 0.91
CX3CR1P49238 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CX3CR1P49238 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CX3CR1P49238 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CX3CR1P49238 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CX3CR1P49238 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CX3CR1P49238 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CX3CR1P49238 RAP2CP1-202ENST00000605179 643 ntBASIC20.7■□□□□ 0.9
CX3CR1P49238 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CX3CR1P49238 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.7■□□□□ 0.9
CX3CR1P49238 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CX3CR1P49238 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CX3CR1P49238 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CX3CR1P49238 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CX3CR1P49238 AL139125.2-201ENST00000623134 1869 ntBASIC20.69■□□□□ 0.9
CX3CR1P49238 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CX3CR1P49238 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CX3CR1P49238 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.69■□□□□ 0.9
CX3CR1P49238 AC026202.3-201ENST00000600805 1127 ntBASIC20.69■□□□□ 0.9
CX3CR1P49238 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CX3CR1P49238 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CX3CR1P49238 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CX3CR1P49238 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CX3CR1P49238 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CX3CR1P49238 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CX3CR1P49238 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CX3CR1P49238 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.68■□□□□ 0.9
CX3CR1P49238 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CX3CR1P49238 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CX3CR1P49238 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CX3CR1P49238 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CX3CR1P49238 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
CX3CR1P49238 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CX3CR1P49238 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CX3CR1P49238 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CX3CR1P49238 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CX3CR1P49238 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.68■□□□□ 0.9
CX3CR1P49238 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CX3CR1P49238 AP003733.4-201ENST00000623785 1697 ntBASIC20.67■□□□□ 0.9
CX3CR1P49238 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms