Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAA4P35542 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAA4P35542 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.27■□□□□ 0.68
SAA4P35542 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SAA4P35542 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.27■□□□□ 0.68
SAA4P35542 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SAA4P35542 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
SAA4P35542 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SAA4P35542 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.26■□□□□ 0.67
SAA4P35542 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.26■□□□□ 0.67
SAA4P35542 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SAA4P35542 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SAA4P35542 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SAA4P35542 AL035685.1-201ENST00000636663 812 ntBASIC19.26■□□□□ 0.67
SAA4P35542 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SAA4P35542 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.25■□□□□ 0.67
SAA4P35542 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SAA4P35542 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SAA4P35542 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SAA4P35542 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.25■□□□□ 0.67
SAA4P35542 AC009299.2-201ENST00000482477 511 ntBASIC19.25■□□□□ 0.67
SAA4P35542 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SAA4P35542 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SAA4P35542 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SAA4P35542 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SAA4P35542 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SAA4P35542 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SAA4P35542 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.24■□□□□ 0.67
SAA4P35542 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
SAA4P35542 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SAA4P35542 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SAA4P35542 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SAA4P35542 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SAA4P35542 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SAA4P35542 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SAA4P35542 AL592295.1-201ENST00000400984 884 ntBASIC19.23■□□□□ 0.67
SAA4P35542 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.23■□□□□ 0.67
SAA4P35542 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.23■□□□□ 0.67
SAA4P35542 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
SAA4P35542 AC097639.1-201ENST00000565519 1891 ntBASIC19.22■□□□□ 0.67
SAA4P35542 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SAA4P35542 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.22■□□□□ 0.67
SAA4P35542 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.22■□□□□ 0.67
SAA4P35542 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SAA4P35542 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SAA4P35542 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SAA4P35542 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SAA4P35542 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SAA4P35542 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SAA4P35542 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SAA4P35542 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SAA4P35542 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SAA4P35542 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.21■□□□□ 0.67
SAA4P35542 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.21■□□□□ 0.67
SAA4P35542 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SAA4P35542 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.21■□□□□ 0.67
SAA4P35542 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SAA4P35542 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA4P35542 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.2■□□□□ 0.66
SAA4P35542 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA4P35542 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.2■□□□□ 0.66
SAA4P35542 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SAA4P35542 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
SAA4P35542 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA4P35542 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SAA4P35542 THA1P-201ENST00000590384 1145 ntBASIC19.2■□□□□ 0.66
SAA4P35542 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.2■□□□□ 0.66
SAA4P35542 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.2■□□□□ 0.66
SAA4P35542 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA4P35542 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA4P35542 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA4P35542 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA4P35542 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SAA4P35542 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.19■□□□□ 0.66
SAA4P35542 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SAA4P35542 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.19■□□□□ 0.66
SAA4P35542 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
SAA4P35542 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.18■□□□□ 0.66
SAA4P35542 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SAA4P35542 KRT18P24-201ENST00000344739 1156 ntBASIC19.18■□□□□ 0.66
SAA4P35542 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.18■□□□□ 0.66
SAA4P35542 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.18■□□□□ 0.66
SAA4P35542 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SAA4P35542 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.18■□□□□ 0.66
SAA4P35542 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SAA4P35542 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SAA4P35542 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SAA4P35542 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.17■□□□□ 0.66
SAA4P35542 AC120024.1-201ENST00000562672 995 ntBASIC19.17■□□□□ 0.66
SAA4P35542 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SAA4P35542 FOXO3B-201ENST00000395675 1928 ntBASIC19.17■□□□□ 0.66
SAA4P35542 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SAA4P35542 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SAA4P35542 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SAA4P35542 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SAA4P35542 AC091060.1-201ENST00000623524 1766 ntBASIC19.16■□□□□ 0.66
SAA4P35542 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SAA4P35542 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SAA4P35542 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
SAA4P35542 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms