Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
GDF1P27539 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GDF1P27539 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GDF1P27539 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GDF1P27539 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GDF1P27539 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GDF1P27539 AC009299.2-201ENST00000482477 511 ntBASIC21.57■■□□□ 1.04
GDF1P27539 AC010501.1-201ENST00000606270 1962 ntBASIC21.57■■□□□ 1.04
GDF1P27539 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GDF1P27539 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GDF1P27539 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GDF1P27539 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.56■■□□□ 1.04
GDF1P27539 AC096887.2-201ENST00000623443 1957 ntBASIC21.56■■□□□ 1.04
GDF1P27539 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GDF1P27539 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GDF1P27539 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GDF1P27539 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GDF1P27539 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GDF1P27539 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
GDF1P27539 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
GDF1P27539 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
GDF1P27539 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GDF1P27539 AL592295.1-201ENST00000400984 884 ntBASIC21.55■■□□□ 1.04
GDF1P27539 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.55■■□□□ 1.04
GDF1P27539 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
GDF1P27539 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.55■■□□□ 1.04
GDF1P27539 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.55■■□□□ 1.04
GDF1P27539 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
GDF1P27539 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GDF1P27539 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GDF1P27539 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
GDF1P27539 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GDF1P27539 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.54■■□□□ 1.04
GDF1P27539 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.54■■□□□ 1.04
GDF1P27539 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GDF1P27539 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
GDF1P27539 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.54■■□□□ 1.04
GDF1P27539 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
GDF1P27539 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GDF1P27539 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.53■■□□□ 1.04
GDF1P27539 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.53■■□□□ 1.04
GDF1P27539 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GDF1P27539 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GDF1P27539 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GDF1P27539 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GDF1P27539 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
GDF1P27539 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.52■■□□□ 1.04
GDF1P27539 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GDF1P27539 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.52■■□□□ 1.04
GDF1P27539 THA1P-201ENST00000590384 1145 ntBASIC21.52■■□□□ 1.04
GDF1P27539 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GDF1P27539 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.52■■□□□ 1.03
GDF1P27539 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GDF1P27539 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GDF1P27539 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.51■■□□□ 1.03
GDF1P27539 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GDF1P27539 AC097639.1-201ENST00000565519 1891 ntBASIC21.51■■□□□ 1.03
GDF1P27539 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
GDF1P27539 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
GDF1P27539 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
GDF1P27539 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.5■■□□□ 1.03
GDF1P27539 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.5■■□□□ 1.03
GDF1P27539 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GDF1P27539 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.5■■□□□ 1.03
GDF1P27539 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.5■■□□□ 1.03
GDF1P27539 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDF1P27539 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
GDF1P27539 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDF1P27539 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDF1P27539 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.49■■□□□ 1.03
GDF1P27539 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GDF1P27539 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
GDF1P27539 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDF1P27539 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GDF1P27539 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.48■■□□□ 1.03
GDF1P27539 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.48■■□□□ 1.03
GDF1P27539 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF1P27539 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
GDF1P27539 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GDF1P27539 KRT18P24-201ENST00000344739 1156 ntBASIC21.48■■□□□ 1.03
GDF1P27539 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
GDF1P27539 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.48■■□□□ 1.03
GDF1P27539 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GDF1P27539 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF1P27539 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF1P27539 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF1P27539 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.47■■□□□ 1.03
GDF1P27539 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDF1P27539 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDF1P27539 AC120024.1-201ENST00000562672 995 ntBASIC21.47■■□□□ 1.03
GDF1P27539 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
GDF1P27539 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GDF1P27539 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
GDF1P27539 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.47■■□□□ 1.03
GDF1P27539 FOXO3B-201ENST00000395675 1928 ntBASIC21.47■■□□□ 1.03
GDF1P27539 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.46■■□□□ 1.03
GDF1P27539 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GDF1P27539 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GDF1P27539 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
GDF1P27539 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms