Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM18P0DKX4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM18P0DKX4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM18P0DKX4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.84■■□□□ 1.09
SMIM18P0DKX4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM18P0DKX4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.84■■□□□ 1.09
SMIM18P0DKX4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM18P0DKX4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMIM18P0DKX4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
SMIM18P0DKX4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMIM18P0DKX4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.83■■□□□ 1.09
SMIM18P0DKX4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SMIM18P0DKX4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.82■■□□□ 1.08
SMIM18P0DKX4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM18P0DKX4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.82■■□□□ 1.08
SMIM18P0DKX4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMIM18P0DKX4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMIM18P0DKX4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.81■■□□□ 1.08
SMIM18P0DKX4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMIM18P0DKX4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM18P0DKX4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM18P0DKX4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.8■■□□□ 1.08
SMIM18P0DKX4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMIM18P0DKX4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM18P0DKX4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.79■■□□□ 1.08
SMIM18P0DKX4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM18P0DKX4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM18P0DKX4 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.79■■□□□ 1.08
SMIM18P0DKX4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.79■■□□□ 1.08
SMIM18P0DKX4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM18P0DKX4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM18P0DKX4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM18P0DKX4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMIM18P0DKX4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM18P0DKX4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM18P0DKX4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM18P0DKX4 SLC6A10P-202ENST00000431994 2058 ntBASIC21.78■■□□□ 1.08
SMIM18P0DKX4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SMIM18P0DKX4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.77■■□□□ 1.08
SMIM18P0DKX4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM18P0DKX4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM18P0DKX4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.77■■□□□ 1.08
SMIM18P0DKX4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.77■■□□□ 1.08
SMIM18P0DKX4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.77■■□□□ 1.08
SMIM18P0DKX4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMIM18P0DKX4 AC007375.3-201ENST00000600936 2314 ntBASIC21.77■■□□□ 1.07
SMIM18P0DKX4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.77■■□□□ 1.07
SMIM18P0DKX4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMIM18P0DKX4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.76■■□□□ 1.07
SMIM18P0DKX4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMIM18P0DKX4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMIM18P0DKX4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.76■■□□□ 1.07
SMIM18P0DKX4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
SMIM18P0DKX4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SMIM18P0DKX4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM18P0DKX4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM18P0DKX4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM18P0DKX4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM18P0DKX4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SMIM18P0DKX4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SMIM18P0DKX4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM18P0DKX4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMIM18P0DKX4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMIM18P0DKX4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMIM18P0DKX4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMIM18P0DKX4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMIM18P0DKX4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMIM18P0DKX4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMIM18P0DKX4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMIM18P0DKX4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.74■■□□□ 1.07
SMIM18P0DKX4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SMIM18P0DKX4 AC137767.1-201ENST00000602918 1920 ntBASIC21.74■■□□□ 1.07
SMIM18P0DKX4 SLC25A24-204ENST00000569674 2357 ntBASIC21.74■■□□□ 1.07
SMIM18P0DKX4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SMIM18P0DKX4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.74■■□□□ 1.07
SMIM18P0DKX4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SMIM18P0DKX4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMIM18P0DKX4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SMIM18P0DKX4 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMIM18P0DKX4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.73■■□□□ 1.07
SMIM18P0DKX4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.73■■□□□ 1.07
SMIM18P0DKX4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMIM18P0DKX4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMIM18P0DKX4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMIM18P0DKX4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.73■■□□□ 1.07
SMIM18P0DKX4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.73■■□□□ 1.07
SMIM18P0DKX4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMIM18P0DKX4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMIM18P0DKX4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.72■■□□□ 1.07
SMIM18P0DKX4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMIM18P0DKX4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
SMIM18P0DKX4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SMIM18P0DKX4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.72■■□□□ 1.07
SMIM18P0DKX4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMIM18P0DKX4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMIM18P0DKX4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.71■■□□□ 1.07
SMIM18P0DKX4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMIM18P0DKX4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMIM18P0DKX4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMIM18P0DKX4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms