Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LTAP01374 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LTAP01374 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LTAP01374 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LTAP01374 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LTAP01374 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.85■□□□□ 0.45
LTAP01374 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LTAP01374 AC008813.1-201ENST00000536597 885 ntBASIC17.85■□□□□ 0.45
LTAP01374 AL359258.2-201ENST00000564063 1566 ntBASIC17.85■□□□□ 0.45
LTAP01374 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.85■□□□□ 0.45
LTAP01374 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LTAP01374 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LTAP01374 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LTAP01374 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.84■□□□□ 0.45
LTAP01374 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LTAP01374 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LTAP01374 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LTAP01374 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.84■□□□□ 0.45
LTAP01374 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LTAP01374 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LTAP01374 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LTAP01374 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LTAP01374 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LTAP01374 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LTAP01374 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LTAP01374 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LTAP01374 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LTAP01374 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
LTAP01374 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LTAP01374 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LTAP01374 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LTAP01374 AC004812.2-201ENST00000611079 2094 ntBASIC17.83■□□□□ 0.45
LTAP01374 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LTAP01374 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.83■□□□□ 0.44
LTAP01374 AC148477.6-201ENST00000623746 465 ntBASIC17.83■□□□□ 0.44
LTAP01374 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
LTAP01374 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.83■□□□□ 0.44
LTAP01374 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LTAP01374 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LTAP01374 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LTAP01374 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.83■□□□□ 0.44
LTAP01374 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LTAP01374 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LTAP01374 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LTAP01374 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LTAP01374 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LTAP01374 DUX4L29-201ENST00000425409 679 ntBASIC17.82■□□□□ 0.44
LTAP01374 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LTAP01374 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.82■□□□□ 0.44
LTAP01374 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LTAP01374 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LTAP01374 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LTAP01374 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LTAP01374 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LTAP01374 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LTAP01374 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.81■□□□□ 0.44
LTAP01374 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.81■□□□□ 0.44
LTAP01374 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LTAP01374 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LTAP01374 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LTAP01374 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LTAP01374 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LTAP01374 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.8■□□□□ 0.44
LTAP01374 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LTAP01374 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.79■□□□□ 0.44
LTAP01374 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LTAP01374 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.79■□□□□ 0.44
LTAP01374 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LTAP01374 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LTAP01374 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LTAP01374 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LTAP01374 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.79■□□□□ 0.44
LTAP01374 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LTAP01374 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LTAP01374 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.79■□□□□ 0.44
LTAP01374 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LTAP01374 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LTAP01374 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.78■□□□□ 0.44
LTAP01374 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.78■□□□□ 0.44
LTAP01374 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
LTAP01374 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LTAP01374 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.78■□□□□ 0.44
LTAP01374 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
LTAP01374 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LTAP01374 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LTAP01374 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LTAP01374 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LTAP01374 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.43
LTAP01374 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LTAP01374 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LTAP01374 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.76■□□□□ 0.43
LTAP01374 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.76■□□□□ 0.43
LTAP01374 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.76■□□□□ 0.43
LTAP01374 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LTAP01374 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LTAP01374 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LTAP01374 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LTAP01374 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LTAP01374 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LTAP01374 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms