Protein–RNA interactions for Protein: O43508

TNFSF12, Tumor necrosis factor ligand superfamily member 12, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12O43508 AC126177.7-201ENST00000547904 679 ntBASIC19.63■□□□□ 0.73
TNFSF12O43508 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.63■□□□□ 0.73
TNFSF12O43508 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFSF12O43508 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFSF12O43508 AC097639.1-201ENST00000565519 1891 ntBASIC19.62■□□□□ 0.73
TNFSF12O43508 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFSF12O43508 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TNFSF12O43508 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFSF12O43508 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNFSF12O43508 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TNFSF12O43508 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.62■□□□□ 0.73
TNFSF12O43508 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.62■□□□□ 0.73
TNFSF12O43508 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TNFSF12O43508 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNFSF12O43508 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNFSF12O43508 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFSF12O43508 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNFSF12O43508 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFSF12O43508 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TNFSF12O43508 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF12O43508 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF12O43508 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TNFSF12O43508 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF12O43508 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF12O43508 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF12O43508 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF12O43508 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFSF12O43508 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFSF12O43508 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TNFSF12O43508 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFSF12O43508 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF12O43508 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF12O43508 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFSF12O43508 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF12O43508 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF12O43508 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TNFSF12O43508 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.6■□□□□ 0.73
TNFSF12O43508 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TNFSF12O43508 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.6■□□□□ 0.73
TNFSF12O43508 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF12O43508 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF12O43508 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TNFSF12O43508 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.6■□□□□ 0.73
TNFSF12O43508 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF12O43508 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF12O43508 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF12O43508 SLC6A10P-202ENST00000431994 2058 ntBASIC19.59■□□□□ 0.73
TNFSF12O43508 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
TNFSF12O43508 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF12O43508 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
TNFSF12O43508 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFSF12O43508 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFSF12O43508 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.58■□□□□ 0.73
TNFSF12O43508 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFSF12O43508 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFSF12O43508 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFSF12O43508 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.58■□□□□ 0.72
TNFSF12O43508 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.58■□□□□ 0.72
TNFSF12O43508 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TNFSF12O43508 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF12O43508 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF12O43508 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF12O43508 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF12O43508 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF12O43508 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF12O43508 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF12O43508 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TNFSF12O43508 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
TNFSF12O43508 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF12O43508 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF12O43508 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TNFSF12O43508 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF12O43508 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF12O43508 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
TNFSF12O43508 AP003733.4-201ENST00000623785 1697 ntBASIC19.56■□□□□ 0.72
TNFSF12O43508 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF12O43508 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF12O43508 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF12O43508 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TNFSF12O43508 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TNFSF12O43508 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFSF12O43508 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TNFSF12O43508 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF12O43508 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF12O43508 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF12O43508 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TNFSF12O43508 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF12O43508 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.55■□□□□ 0.72
TNFSF12O43508 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF12O43508 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF12O43508 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
TNFSF12O43508 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF12O43508 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF12O43508 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
TNFSF12O43508 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF12O43508 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.54■□□□□ 0.72
TNFSF12O43508 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TNFSF12O43508 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF12O43508 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF12O43508 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms