Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.33■□□□□ 0.85
PHF1O43189 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.33■□□□□ 0.85
PHF1O43189 AC010980.1-201ENST00000587192 1142 ntBASIC20.33■□□□□ 0.85
PHF1O43189 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
PHF1O43189 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.33■□□□□ 0.84
PHF1O43189 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHF1O43189 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
PHF1O43189 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHF1O43189 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.32■□□□□ 0.84
PHF1O43189 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHF1O43189 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHF1O43189 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHF1O43189 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.31■□□□□ 0.84
PHF1O43189 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.31■□□□□ 0.84
PHF1O43189 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHF1O43189 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHF1O43189 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PHF1O43189 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHF1O43189 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHF1O43189 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHF1O43189 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHF1O43189 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHF1O43189 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHF1O43189 YBX1P4-201ENST00000392794 808 ntBASIC20.3■□□□□ 0.84
PHF1O43189 GUSBP5-201ENST00000418136 578 ntBASIC20.3■□□□□ 0.84
PHF1O43189 RAP2CP1-202ENST00000605179 643 ntBASIC20.3■□□□□ 0.84
PHF1O43189 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHF1O43189 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PHF1O43189 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.3■□□□□ 0.84
PHF1O43189 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.3■□□□□ 0.84
PHF1O43189 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHF1O43189 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PHF1O43189 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PHF1O43189 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.29■□□□□ 0.84
PHF1O43189 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PHF1O43189 AC142472.1-201ENST00000612013 1741 ntBASIC20.29■□□□□ 0.84
PHF1O43189 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PHF1O43189 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PHF1O43189 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PHF1O43189 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PHF1O43189 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.28■□□□□ 0.84
PHF1O43189 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.28■□□□□ 0.84
PHF1O43189 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.28■□□□□ 0.84
PHF1O43189 AC074183.2-201ENST00000623112 922 ntBASIC20.28■□□□□ 0.84
PHF1O43189 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.28■□□□□ 0.84
PHF1O43189 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHF1O43189 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.28■□□□□ 0.84
PHF1O43189 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PHF1O43189 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PHF1O43189 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PHF1O43189 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PHF1O43189 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PHF1O43189 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PHF1O43189 DUX4L9-201ENST00000449051 1259 ntBASIC20.27■□□□□ 0.84
PHF1O43189 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.27■□□□□ 0.84
PHF1O43189 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PHF1O43189 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.26■□□□□ 0.83
PHF1O43189 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHF1O43189 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PHF1O43189 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PHF1O43189 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.25■□□□□ 0.83
PHF1O43189 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHF1O43189 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PHF1O43189 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PHF1O43189 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PHF1O43189 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHF1O43189 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHF1O43189 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PHF1O43189 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.24■□□□□ 0.83
PHF1O43189 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PHF1O43189 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.24■□□□□ 0.83
PHF1O43189 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PHF1O43189 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHF1O43189 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHF1O43189 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHF1O43189 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHF1O43189 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHF1O43189 AC139795.1-202ENST00000500444 432 ntBASIC20.23■□□□□ 0.83
PHF1O43189 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.23■□□□□ 0.83
PHF1O43189 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHF1O43189 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PHF1O43189 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHF1O43189 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHF1O43189 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PHF1O43189 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.22■□□□□ 0.83
PHF1O43189 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PHF1O43189 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PHF1O43189 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PHF1O43189 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PHF1O43189 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
PHF1O43189 SPCS2P3-201ENST00000500401 656 ntBASIC20.22■□□□□ 0.83
PHF1O43189 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PHF1O43189 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.22■□□□□ 0.83
PHF1O43189 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.22■□□□□ 0.83
PHF1O43189 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PHF1O43189 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PHF1O43189 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.22■□□□□ 0.83
PHF1O43189 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PHF1O43189 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PHF1O43189 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms