Protein–RNA interactions for Protein: O00507

USP9Y, Probable ubiquitin carboxyl-terminal hydrolase FAF-Y, humanhuman

Predicted RBP Predictions only

Length 2,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YO00507 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP9YO00507 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.97■□□□□ 0.95
USP9YO00507 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP9YO00507 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
USP9YO00507 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
USP9YO00507 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP9YO00507 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.97■□□□□ 0.95
USP9YO00507 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.97■□□□□ 0.95
USP9YO00507 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
USP9YO00507 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP9YO00507 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP9YO00507 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP9YO00507 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
USP9YO00507 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.96■□□□□ 0.95
USP9YO00507 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.96■□□□□ 0.95
USP9YO00507 AC011551.1-201ENST00000614101 683 ntBASIC20.96■□□□□ 0.95
USP9YO00507 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP9YO00507 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.96■□□□□ 0.95
USP9YO00507 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.96■□□□□ 0.95
USP9YO00507 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP9YO00507 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.96■□□□□ 0.95
USP9YO00507 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.96■□□□□ 0.95
USP9YO00507 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.96■□□□□ 0.95
USP9YO00507 ABCB10P3-201ENST00000561950 2166 ntBASIC20.96■□□□□ 0.95
USP9YO00507 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP9YO00507 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
USP9YO00507 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP9YO00507 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP9YO00507 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP9YO00507 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
USP9YO00507 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP9YO00507 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP9YO00507 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP9YO00507 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
USP9YO00507 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.94■□□□□ 0.94
USP9YO00507 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP9YO00507 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.94■□□□□ 0.94
USP9YO00507 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.94■□□□□ 0.94
USP9YO00507 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
USP9YO00507 AC034268.1-201ENST00000441047 882 ntBASIC20.93■□□□□ 0.94
USP9YO00507 AC022517.1-201ENST00000592429 346 ntBASIC20.93■□□□□ 0.94
USP9YO00507 IKBKGP1-201ENST00000612193 1073 ntBASIC20.93■□□□□ 0.94
USP9YO00507 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.93■□□□□ 0.94
USP9YO00507 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP9YO00507 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP9YO00507 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP9YO00507 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.93■□□□□ 0.94
USP9YO00507 AP002414.2-202ENST00000590929 1450 ntBASIC20.93■□□□□ 0.94
USP9YO00507 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
USP9YO00507 ST7-AS1-201ENST00000456775 1889 ntBASIC20.93■□□□□ 0.94
USP9YO00507 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.93■□□□□ 0.94
USP9YO00507 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP9YO00507 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP9YO00507 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP9YO00507 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP9YO00507 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP9YO00507 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.92■□□□□ 0.94
USP9YO00507 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP9YO00507 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP9YO00507 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP9YO00507 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
USP9YO00507 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
USP9YO00507 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.91■□□□□ 0.94
USP9YO00507 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP9YO00507 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP9YO00507 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.91■□□□□ 0.94
USP9YO00507 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP9YO00507 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.91■□□□□ 0.94
USP9YO00507 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP9YO00507 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
USP9YO00507 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
USP9YO00507 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP9YO00507 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP9YO00507 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.89■□□□□ 0.93
USP9YO00507 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.89■□□□□ 0.93
USP9YO00507 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.89■□□□□ 0.93
USP9YO00507 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.89■□□□□ 0.93
USP9YO00507 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
USP9YO00507 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP9YO00507 AC092437.1-201ENST00000624794 1048 ntBASIC20.89■□□□□ 0.93
USP9YO00507 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.88■□□□□ 0.93
USP9YO00507 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP9YO00507 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP9YO00507 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.88■□□□□ 0.93
USP9YO00507 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.88■□□□□ 0.93
USP9YO00507 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP9YO00507 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
USP9YO00507 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.88■□□□□ 0.93
USP9YO00507 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP9YO00507 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.88■□□□□ 0.93
USP9YO00507 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP9YO00507 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.88■□□□□ 0.93
USP9YO00507 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP9YO00507 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP9YO00507 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.87■□□□□ 0.93
USP9YO00507 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
USP9YO00507 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.86■□□□□ 0.93
USP9YO00507 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP9YO00507 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.86■□□□□ 0.93
USP9YO00507 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms