Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
TMEM88BA6NKF7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
TMEM88BA6NKF7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
TMEM88BA6NKF7 RARRES2P11-201ENST00000635158 484 ntBASIC28.35■■■□□ 2.13
TMEM88BA6NKF7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
TMEM88BA6NKF7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
TMEM88BA6NKF7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.35■■■□□ 2.13
TMEM88BA6NKF7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TMEM88BA6NKF7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
TMEM88BA6NKF7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
TMEM88BA6NKF7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TMEM88BA6NKF7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TMEM88BA6NKF7 AF213884.3-201ENST00000563833 479 ntBASIC28.33■■■□□ 2.13
TMEM88BA6NKF7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC28.32■■■□□ 2.12
TMEM88BA6NKF7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TMEM88BA6NKF7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TMEM88BA6NKF7 GAK-223ENST00000628912 497 ntTSL 5 BASIC28.32■■■□□ 2.12
TMEM88BA6NKF7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.32■■■□□ 2.12
TMEM88BA6NKF7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
TMEM88BA6NKF7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TMEM88BA6NKF7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
TMEM88BA6NKF7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
TMEM88BA6NKF7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TMEM88BA6NKF7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TMEM88BA6NKF7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TMEM88BA6NKF7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TMEM88BA6NKF7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC28.3■■■□□ 2.12
TMEM88BA6NKF7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TMEM88BA6NKF7 GRAMD4P4-201ENST00000613563 1115 ntBASIC28.3■■■□□ 2.12
TMEM88BA6NKF7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
TMEM88BA6NKF7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC28.29■■■□□ 2.12
TMEM88BA6NKF7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC28.29■■■□□ 2.12
TMEM88BA6NKF7 AC011551.1-201ENST00000614101 683 ntBASIC28.29■■■□□ 2.12
TMEM88BA6NKF7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
TMEM88BA6NKF7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
TMEM88BA6NKF7 MIR939-201ENST00000401314 82 ntBASIC28.28■■■□□ 2.12
TMEM88BA6NKF7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC28.28■■■□□ 2.12
TMEM88BA6NKF7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC28.28■■■□□ 2.12
TMEM88BA6NKF7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TMEM88BA6NKF7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
TMEM88BA6NKF7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
TMEM88BA6NKF7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
TMEM88BA6NKF7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.26■■■□□ 2.12
TMEM88BA6NKF7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28.26■■■□□ 2.11
TMEM88BA6NKF7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC28.26■■■□□ 2.11
TMEM88BA6NKF7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TMEM88BA6NKF7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TMEM88BA6NKF7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TMEM88BA6NKF7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TMEM88BA6NKF7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC28.25■■■□□ 2.11
TMEM88BA6NKF7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC28.25■■■□□ 2.11
TMEM88BA6NKF7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TMEM88BA6NKF7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TMEM88BA6NKF7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TMEM88BA6NKF7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
TMEM88BA6NKF7 SRD5A1P1-201ENST00000442297 786 ntBASIC28.24■■■□□ 2.11
TMEM88BA6NKF7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TMEM88BA6NKF7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC28.23■■■□□ 2.11
TMEM88BA6NKF7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC28.23■■■□□ 2.11
TMEM88BA6NKF7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
TMEM88BA6NKF7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.22■■■□□ 2.11
TMEM88BA6NKF7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.22■■■□□ 2.11
TMEM88BA6NKF7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC28.22■■■□□ 2.11
TMEM88BA6NKF7 AP001330.3-201ENST00000520123 633 ntBASIC28.22■■■□□ 2.11
TMEM88BA6NKF7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC28.22■■■□□ 2.11
TMEM88BA6NKF7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TMEM88BA6NKF7 AC091305.1-201ENST00000479476 895 ntBASIC28.21■■■□□ 2.11
TMEM88BA6NKF7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC28.21■■■□□ 2.11
TMEM88BA6NKF7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TMEM88BA6NKF7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
TMEM88BA6NKF7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
TMEM88BA6NKF7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TMEM88BA6NKF7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC28.2■■■□□ 2.1
TMEM88BA6NKF7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TMEM88BA6NKF7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TMEM88BA6NKF7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TMEM88BA6NKF7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
TMEM88BA6NKF7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
TMEM88BA6NKF7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TMEM88BA6NKF7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TMEM88BA6NKF7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
TMEM88BA6NKF7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TMEM88BA6NKF7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TMEM88BA6NKF7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC28.17■■■□□ 2.1
TMEM88BA6NKF7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
TMEM88BA6NKF7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC28.16■■■□□ 2.1
TMEM88BA6NKF7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC28.16■■■□□ 2.1
TMEM88BA6NKF7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TMEM88BA6NKF7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TMEM88BA6NKF7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC28.15■■■□□ 2.1
TMEM88BA6NKF7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC28.15■■■□□ 2.1
TMEM88BA6NKF7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC28.15■■■□□ 2.1
TMEM88BA6NKF7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC28.15■■■□□ 2.1
TMEM88BA6NKF7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC28.15■■■□□ 2.1
TMEM88BA6NKF7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TMEM88BA6NKF7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC28.14■■■□□ 2.1
TMEM88BA6NKF7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC28.14■■■□□ 2.1
TMEM88BA6NKF7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC28.14■■■□□ 2.1
TMEM88BA6NKF7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
TMEM88BA6NKF7 AL139393.2-201ENST00000608721 2025 ntBASIC28.14■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms