Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HTR3EA5X5Y0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HTR3EA5X5Y0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HTR3EA5X5Y0 AL024507.2-201ENST00000606070 2574 ntBASIC21.81■■□□□ 1.08
HTR3EA5X5Y0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.8■■□□□ 1.08
HTR3EA5X5Y0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
HTR3EA5X5Y0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.8■■□□□ 1.08
HTR3EA5X5Y0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HTR3EA5X5Y0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HTR3EA5X5Y0 AC096887.2-201ENST00000623443 1957 ntBASIC21.79■■□□□ 1.08
HTR3EA5X5Y0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.79■■□□□ 1.08
HTR3EA5X5Y0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HTR3EA5X5Y0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HTR3EA5X5Y0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.79■■□□□ 1.08
HTR3EA5X5Y0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HTR3EA5X5Y0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HTR3EA5X5Y0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HTR3EA5X5Y0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HTR3EA5X5Y0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HTR3EA5X5Y0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HTR3EA5X5Y0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.79■■□□□ 1.08
HTR3EA5X5Y0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HTR3EA5X5Y0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HTR3EA5X5Y0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
HTR3EA5X5Y0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HTR3EA5X5Y0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.78■■□□□ 1.08
HTR3EA5X5Y0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HTR3EA5X5Y0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
HTR3EA5X5Y0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.77■■□□□ 1.08
HTR3EA5X5Y0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HTR3EA5X5Y0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTR3EA5X5Y0 AC142381.3-201ENST00000568208 1670 ntBASIC21.77■■□□□ 1.08
HTR3EA5X5Y0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HTR3EA5X5Y0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTR3EA5X5Y0 MIR639-201ENST00000384974 98 ntBASIC21.77■■□□□ 1.08
HTR3EA5X5Y0 AC025884.2-201ENST00000553429 711 ntBASIC21.77■■□□□ 1.08
HTR3EA5X5Y0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.77■■□□□ 1.08
HTR3EA5X5Y0 MIR7108-201ENST00000614319 87 ntBASIC21.77■■□□□ 1.08
HTR3EA5X5Y0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTR3EA5X5Y0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTR3EA5X5Y0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
HTR3EA5X5Y0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
HTR3EA5X5Y0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTR3EA5X5Y0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTR3EA5X5Y0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTR3EA5X5Y0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.76■■□□□ 1.07
HTR3EA5X5Y0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.76■■□□□ 1.07
HTR3EA5X5Y0 MIR3960-201ENST00000583311 91 ntBASIC21.76■■□□□ 1.07
HTR3EA5X5Y0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.76■■□□□ 1.07
HTR3EA5X5Y0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTR3EA5X5Y0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.75■■□□□ 1.07
HTR3EA5X5Y0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
HTR3EA5X5Y0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.75■■□□□ 1.07
HTR3EA5X5Y0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HTR3EA5X5Y0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
HTR3EA5X5Y0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
HTR3EA5X5Y0 AC060814.1-201ENST00000554326 538 ntBASIC21.75■■□□□ 1.07
HTR3EA5X5Y0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HTR3EA5X5Y0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HTR3EA5X5Y0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HTR3EA5X5Y0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HTR3EA5X5Y0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HTR3EA5X5Y0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HTR3EA5X5Y0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
HTR3EA5X5Y0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HTR3EA5X5Y0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR3EA5X5Y0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR3EA5X5Y0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR3EA5X5Y0 AL157400.5-201ENST00000507624 621 ntBASIC21.73■■□□□ 1.07
HTR3EA5X5Y0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.73■■□□□ 1.07
HTR3EA5X5Y0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HTR3EA5X5Y0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HTR3EA5X5Y0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HTR3EA5X5Y0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.72■■□□□ 1.07
HTR3EA5X5Y0 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.72■■□□□ 1.07
HTR3EA5X5Y0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.71■■□□□ 1.07
HTR3EA5X5Y0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.71■■□□□ 1.07
HTR3EA5X5Y0 AC092296.2-201ENST00000589470 999 ntBASIC21.71■■□□□ 1.07
HTR3EA5X5Y0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
HTR3EA5X5Y0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
HTR3EA5X5Y0 AC068473.5-201ENST00000616428 2072 ntBASIC21.71■■□□□ 1.07
HTR3EA5X5Y0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HTR3EA5X5Y0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HTR3EA5X5Y0 AC097639.1-201ENST00000565519 1891 ntBASIC21.71■■□□□ 1.07
HTR3EA5X5Y0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
HTR3EA5X5Y0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HTR3EA5X5Y0 SMPD5-203ENST00000639008 1464 ntBASIC21.7■■□□□ 1.06
HTR3EA5X5Y0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.7■■□□□ 1.06
HTR3EA5X5Y0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR3EA5X5Y0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HTR3EA5X5Y0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HTR3EA5X5Y0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HTR3EA5X5Y0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.69■■□□□ 1.06
HTR3EA5X5Y0 ECEL1P2-201ENST00000461596 1295 ntBASIC21.69■■□□□ 1.06
HTR3EA5X5Y0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HTR3EA5X5Y0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HTR3EA5X5Y0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
HTR3EA5X5Y0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HTR3EA5X5Y0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HTR3EA5X5Y0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms