Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC004812.2-201ENST00000611079 2094 ntBASIC20.87■□□□□ 0.93
TRDV1A0A1B0GX56 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRDV1A0A1B0GX56 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRDV1A0A1B0GX56 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.87■□□□□ 0.93
TRDV1A0A1B0GX56 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRDV1A0A1B0GX56 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRDV1A0A1B0GX56 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRDV1A0A1B0GX56 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRDV1A0A1B0GX56 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRDV1A0A1B0GX56 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TRDV1A0A1B0GX56 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.87■□□□□ 0.93
TRDV1A0A1B0GX56 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRDV1A0A1B0GX56 AL359504.2-201ENST00000605506 1601 ntBASIC20.86■□□□□ 0.93
TRDV1A0A1B0GX56 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRDV1A0A1B0GX56 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRDV1A0A1B0GX56 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRDV1A0A1B0GX56 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.86■□□□□ 0.93
TRDV1A0A1B0GX56 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TRDV1A0A1B0GX56 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.86■□□□□ 0.93
TRDV1A0A1B0GX56 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRDV1A0A1B0GX56 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRDV1A0A1B0GX56 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRDV1A0A1B0GX56 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TRDV1A0A1B0GX56 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRDV1A0A1B0GX56 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRDV1A0A1B0GX56 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TRDV1A0A1B0GX56 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRDV1A0A1B0GX56 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRDV1A0A1B0GX56 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.85■□□□□ 0.93
TRDV1A0A1B0GX56 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TRDV1A0A1B0GX56 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRDV1A0A1B0GX56 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRDV1A0A1B0GX56 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
TRDV1A0A1B0GX56 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.84■□□□□ 0.93
TRDV1A0A1B0GX56 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRDV1A0A1B0GX56 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRDV1A0A1B0GX56 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRDV1A0A1B0GX56 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRDV1A0A1B0GX56 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRDV1A0A1B0GX56 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.82■□□□□ 0.92
TRDV1A0A1B0GX56 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRDV1A0A1B0GX56 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRDV1A0A1B0GX56 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.82■□□□□ 0.92
TRDV1A0A1B0GX56 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRDV1A0A1B0GX56 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRDV1A0A1B0GX56 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TRDV1A0A1B0GX56 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRDV1A0A1B0GX56 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRDV1A0A1B0GX56 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TRDV1A0A1B0GX56 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.81■□□□□ 0.92
TRDV1A0A1B0GX56 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.81■□□□□ 0.92
TRDV1A0A1B0GX56 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
TRDV1A0A1B0GX56 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.81■□□□□ 0.92
TRDV1A0A1B0GX56 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TRDV1A0A1B0GX56 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRDV1A0A1B0GX56 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRDV1A0A1B0GX56 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRDV1A0A1B0GX56 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TRDV1A0A1B0GX56 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.8■□□□□ 0.92
TRDV1A0A1B0GX56 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRDV1A0A1B0GX56 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.8■□□□□ 0.92
TRDV1A0A1B0GX56 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRDV1A0A1B0GX56 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.79■□□□□ 0.92
TRDV1A0A1B0GX56 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.79■□□□□ 0.92
TRDV1A0A1B0GX56 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRDV1A0A1B0GX56 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.79■□□□□ 0.92
TRDV1A0A1B0GX56 CLDN5-201ENST00000403084 2357 ntBASIC20.79■□□□□ 0.92
TRDV1A0A1B0GX56 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
TRDV1A0A1B0GX56 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRDV1A0A1B0GX56 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRDV1A0A1B0GX56 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRDV1A0A1B0GX56 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRDV1A0A1B0GX56 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRDV1A0A1B0GX56 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.78■□□□□ 0.92
TRDV1A0A1B0GX56 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRDV1A0A1B0GX56 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.78■□□□□ 0.92
TRDV1A0A1B0GX56 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.78■□□□□ 0.92
TRDV1A0A1B0GX56 AC087741.3-201ENST00000624270 1347 ntBASIC20.78■□□□□ 0.92
TRDV1A0A1B0GX56 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRDV1A0A1B0GX56 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRDV1A0A1B0GX56 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRDV1A0A1B0GX56 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRDV1A0A1B0GX56 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.77■□□□□ 0.92
TRDV1A0A1B0GX56 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.77■□□□□ 0.92
TRDV1A0A1B0GX56 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRDV1A0A1B0GX56 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TRDV1A0A1B0GX56 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRDV1A0A1B0GX56 AL359258.2-201ENST00000564063 1566 ntBASIC20.76■□□□□ 0.91
TRDV1A0A1B0GX56 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRDV1A0A1B0GX56 ABCB10P4-201ENST00000566803 2184 ntBASIC20.76■□□□□ 0.91
TRDV1A0A1B0GX56 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRDV1A0A1B0GX56 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRDV1A0A1B0GX56 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
TRDV1A0A1B0GX56 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRDV1A0A1B0GX56 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRDV1A0A1B0GX56 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRDV1A0A1B0GX56 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.76■□□□□ 0.91
TRDV1A0A1B0GX56 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRDV1A0A1B0GX56 AP006261.1-201ENST00000584783 668 ntBASIC20.76■□□□□ 0.91
TRDV1A0A1B0GX56 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms