Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 SLC6A10P-202ENST00000431994 2058 ntBASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 AC060814.1-201ENST00000554326 538 ntBASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRBV7-9A0A0J9YWB2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV7-9A0A0J9YWB2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
TRBV7-9A0A0J9YWB2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRBV7-9A0A0J9YWB2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV7-9A0A0J9YWB2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV7-9A0A0J9YWB2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV7-9A0A0J9YWB2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV7-9A0A0J9YWB2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV7-9A0A0J9YWB2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV7-9A0A0J9YWB2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV7-9A0A0J9YWB2 AC141586.4-201ENST00000624558 1573 ntBASIC17.62■□□□□ 0.41
TRBV7-9A0A0J9YWB2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV7-9A0A0J9YWB2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV7-9A0A0J9YWB2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV7-9A0A0J9YWB2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV7-9A0A0J9YWB2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV7-9A0A0J9YWB2 SMPD5-203ENST00000639008 1464 ntBASIC17.61■□□□□ 0.41
TRBV7-9A0A0J9YWB2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV7-9A0A0J9YWB2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV7-9A0A0J9YWB2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV7-9A0A0J9YWB2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.6■□□□□ 0.41
TRBV7-9A0A0J9YWB2 AC092296.2-201ENST00000589470 999 ntBASIC17.6■□□□□ 0.41
TRBV7-9A0A0J9YWB2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRBV7-9A0A0J9YWB2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV7-9A0A0J9YWB2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV7-9A0A0J9YWB2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRBV7-9A0A0J9YWB2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV7-9A0A0J9YWB2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV7-9A0A0J9YWB2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV7-9A0A0J9YWB2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV7-9A0A0J9YWB2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRBV7-9A0A0J9YWB2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV7-9A0A0J9YWB2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV7-9A0A0J9YWB2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV7-9A0A0J9YWB2 KRT18P10-201ENST00000388836 1287 ntBASIC17.59■□□□□ 0.41
TRBV7-9A0A0J9YWB2 ECEL1P2-201ENST00000461596 1295 ntBASIC17.59■□□□□ 0.41
TRBV7-9A0A0J9YWB2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV7-9A0A0J9YWB2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV7-9A0A0J9YWB2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV7-9A0A0J9YWB2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV7-9A0A0J9YWB2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRBV7-9A0A0J9YWB2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV7-9A0A0J9YWB2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV7-9A0A0J9YWB2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.58■□□□□ 0.41
TRBV7-9A0A0J9YWB2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.58■□□□□ 0.41
TRBV7-9A0A0J9YWB2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV7-9A0A0J9YWB2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.58■□□□□ 0.4
TRBV7-9A0A0J9YWB2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV7-9A0A0J9YWB2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV7-9A0A0J9YWB2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV7-9A0A0J9YWB2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV7-9A0A0J9YWB2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV7-9A0A0J9YWB2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV7-9A0A0J9YWB2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRBV7-9A0A0J9YWB2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV7-9A0A0J9YWB2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV7-9A0A0J9YWB2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV7-9A0A0J9YWB2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRBV7-9A0A0J9YWB2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.56■□□□□ 0.4
TRBV7-9A0A0J9YWB2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.56■□□□□ 0.4
TRBV7-9A0A0J9YWB2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.56■□□□□ 0.4
TRBV7-9A0A0J9YWB2 MIR6089-201ENST00000616698 64 ntBASIC17.56■□□□□ 0.4
TRBV7-9A0A0J9YWB2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV7-9A0A0J9YWB2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV7-9A0A0J9YWB2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV7-9A0A0J9YWB2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV7-9A0A0J9YWB2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV7-9A0A0J9YWB2 MIR639-201ENST00000384974 98 ntBASIC17.55■□□□□ 0.4
TRBV7-9A0A0J9YWB2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.55■□□□□ 0.4
TRBV7-9A0A0J9YWB2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.55■□□□□ 0.4
TRBV7-9A0A0J9YWB2 LINC00543-201ENST00000567234 1845 ntBASIC17.55■□□□□ 0.4
TRBV7-9A0A0J9YWB2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV7-9A0A0J9YWB2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV7-9A0A0J9YWB2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV7-9A0A0J9YWB2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV7-9A0A0J9YWB2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV7-9A0A0J9YWB2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRBV7-9A0A0J9YWB2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV7-9A0A0J9YWB2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.54■□□□□ 0.4
TRBV7-9A0A0J9YWB2 RP9P-202ENST00000450133 1212 ntBASIC17.54■□□□□ 0.4
TRBV7-9A0A0J9YWB2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms