Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRGV5A0A0B4J1U4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.43■■□□□ 1.02
TRGV5A0A0B4J1U4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRGV5A0A0B4J1U4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
TRGV5A0A0B4J1U4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRGV5A0A0B4J1U4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.42■■□□□ 1.02
TRGV5A0A0B4J1U4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRGV5A0A0B4J1U4 BX664725.1-201ENST00000438252 379 ntBASIC21.42■■□□□ 1.02
TRGV5A0A0B4J1U4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRGV5A0A0B4J1U4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRGV5A0A0B4J1U4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRGV5A0A0B4J1U4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.41■■□□□ 1.02
TRGV5A0A0B4J1U4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.41■■□□□ 1.02
TRGV5A0A0B4J1U4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRGV5A0A0B4J1U4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.41■■□□□ 1.02
TRGV5A0A0B4J1U4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRGV5A0A0B4J1U4 KRT125P-201ENST00000546827 989 ntBASIC21.41■■□□□ 1.02
TRGV5A0A0B4J1U4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRGV5A0A0B4J1U4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
TRGV5A0A0B4J1U4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.4■■□□□ 1.02
TRGV5A0A0B4J1U4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRGV5A0A0B4J1U4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRGV5A0A0B4J1U4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRGV5A0A0B4J1U4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRGV5A0A0B4J1U4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRGV5A0A0B4J1U4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.39■■□□□ 1.01
TRGV5A0A0B4J1U4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRGV5A0A0B4J1U4 AL121749.1-202ENST00000609313 2153 ntBASIC21.38■■□□□ 1.01
TRGV5A0A0B4J1U4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRGV5A0A0B4J1U4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRGV5A0A0B4J1U4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRGV5A0A0B4J1U4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.38■■□□□ 1.01
TRGV5A0A0B4J1U4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TRGV5A0A0B4J1U4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRGV5A0A0B4J1U4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRGV5A0A0B4J1U4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRGV5A0A0B4J1U4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRGV5A0A0B4J1U4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
TRGV5A0A0B4J1U4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRGV5A0A0B4J1U4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.37■■□□□ 1.01
TRGV5A0A0B4J1U4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.37■■□□□ 1.01
TRGV5A0A0B4J1U4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRGV5A0A0B4J1U4 ERN1-208ENST00000606895 2068 ntBASIC21.36■■□□□ 1.01
TRGV5A0A0B4J1U4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRGV5A0A0B4J1U4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRGV5A0A0B4J1U4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TRGV5A0A0B4J1U4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRGV5A0A0B4J1U4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRGV5A0A0B4J1U4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.36■■□□□ 1.01
TRGV5A0A0B4J1U4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.36■■□□□ 1.01
TRGV5A0A0B4J1U4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRGV5A0A0B4J1U4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.36■■□□□ 1.01
TRGV5A0A0B4J1U4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRGV5A0A0B4J1U4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.36■■□□□ 1.01
TRGV5A0A0B4J1U4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.35■■□□□ 1.01
TRGV5A0A0B4J1U4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRGV5A0A0B4J1U4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRGV5A0A0B4J1U4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRGV5A0A0B4J1U4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRGV5A0A0B4J1U4 MIR4787-201ENST00000607364 84 ntBASIC21.35■■□□□ 1.01
TRGV5A0A0B4J1U4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.34■■□□□ 1.01
TRGV5A0A0B4J1U4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRGV5A0A0B4J1U4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRGV5A0A0B4J1U4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
TRGV5A0A0B4J1U4 AC137630.3-201ENST00000607245 391 ntBASIC21.34■■□□□ 1.01
TRGV5A0A0B4J1U4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.34■■□□□ 1.01
TRGV5A0A0B4J1U4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRGV5A0A0B4J1U4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRGV5A0A0B4J1U4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRGV5A0A0B4J1U4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRGV5A0A0B4J1U4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRGV5A0A0B4J1U4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.33■■□□□ 1.01
TRGV5A0A0B4J1U4 AC011551.1-201ENST00000614101 683 ntBASIC21.33■■□□□ 1.01
TRGV5A0A0B4J1U4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRGV5A0A0B4J1U4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
TRGV5A0A0B4J1U4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRGV5A0A0B4J1U4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.33■■□□□ 1
TRGV5A0A0B4J1U4 AC096887.2-201ENST00000623443 1957 ntBASIC21.32■■□□□ 1
TRGV5A0A0B4J1U4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
TRGV5A0A0B4J1U4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.32■■□□□ 1
TRGV5A0A0B4J1U4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRGV5A0A0B4J1U4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRGV5A0A0B4J1U4 FOXO3B-201ENST00000395675 1928 ntBASIC21.32■■□□□ 1
TRGV5A0A0B4J1U4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.32■■□□□ 1
TRGV5A0A0B4J1U4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRGV5A0A0B4J1U4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TRGV5A0A0B4J1U4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.32■■□□□ 1
TRGV5A0A0B4J1U4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.32■■□□□ 1
TRGV5A0A0B4J1U4 MIR4281-201ENST00000580852 62 ntBASIC21.32■■□□□ 1
TRGV5A0A0B4J1U4 AC131212.1-201ENST00000613771 668 ntBASIC21.32■■□□□ 1
TRGV5A0A0B4J1U4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRGV5A0A0B4J1U4 AC010501.1-201ENST00000606270 1962 ntBASIC21.32■■□□□ 1
TRGV5A0A0B4J1U4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.32■■□□□ 1
TRGV5A0A0B4J1U4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.32■■□□□ 1
TRGV5A0A0B4J1U4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRGV5A0A0B4J1U4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TRGV5A0A0B4J1U4 AC097639.1-201ENST00000565519 1891 ntBASIC21.31■■□□□ 1
TRGV5A0A0B4J1U4 AL356441.2-201ENST00000443009 864 ntBASIC21.31■■□□□ 1
TRGV5A0A0B4J1U4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.31■■□□□ 1
TRGV5A0A0B4J1U4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms