Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.72■■□□□ 1.23
CCDC187A0A096LP49 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC187A0A096LP49 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
CCDC187A0A096LP49 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC187A0A096LP49 AP004609.3-201ENST00000610705 1884 ntBASIC22.71■■□□□ 1.23
CCDC187A0A096LP49 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
CCDC187A0A096LP49 AL136116.3-201ENST00000402907 1138 ntBASIC22.71■■□□□ 1.23
CCDC187A0A096LP49 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.71■■□□□ 1.23
CCDC187A0A096LP49 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.71■■□□□ 1.23
CCDC187A0A096LP49 MIR6724-1-201ENST00000616420 92 ntBASIC22.71■■□□□ 1.23
CCDC187A0A096LP49 MIR6724-2-201ENST00000616483 92 ntBASIC22.71■■□□□ 1.23
CCDC187A0A096LP49 MIR6724-4-201ENST00000617390 92 ntBASIC22.71■■□□□ 1.23
CCDC187A0A096LP49 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.71■■□□□ 1.23
CCDC187A0A096LP49 MIR6724-3-201ENST00000622482 92 ntBASIC22.71■■□□□ 1.23
CCDC187A0A096LP49 AL117332.1-201ENST00000622628 974 ntBASIC22.71■■□□□ 1.23
CCDC187A0A096LP49 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC187A0A096LP49 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC187A0A096LP49 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
CCDC187A0A096LP49 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.7■■□□□ 1.22
CCDC187A0A096LP49 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
CCDC187A0A096LP49 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
CCDC187A0A096LP49 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC187A0A096LP49 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
CCDC187A0A096LP49 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
CCDC187A0A096LP49 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC187A0A096LP49 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.69■■□□□ 1.22
CCDC187A0A096LP49 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC187A0A096LP49 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.69■■□□□ 1.22
CCDC187A0A096LP49 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.69■■□□□ 1.22
CCDC187A0A096LP49 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CCDC187A0A096LP49 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC187A0A096LP49 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.68■■□□□ 1.22
CCDC187A0A096LP49 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.68■■□□□ 1.22
CCDC187A0A096LP49 MIR3621-201ENST00000580529 85 ntBASIC22.68■■□□□ 1.22
CCDC187A0A096LP49 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC187A0A096LP49 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC187A0A096LP49 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.68■■□□□ 1.22
CCDC187A0A096LP49 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC187A0A096LP49 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC187A0A096LP49 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC187A0A096LP49 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.67■■□□□ 1.22
CCDC187A0A096LP49 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.67■■□□□ 1.22
CCDC187A0A096LP49 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC187A0A096LP49 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
CCDC187A0A096LP49 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC187A0A096LP49 AL356740.2-201ENST00000601559 647 ntBASIC22.67■■□□□ 1.22
CCDC187A0A096LP49 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC187A0A096LP49 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.67■■□□□ 1.22
CCDC187A0A096LP49 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CCDC187A0A096LP49 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC187A0A096LP49 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC187A0A096LP49 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CCDC187A0A096LP49 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC187A0A096LP49 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC187A0A096LP49 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CCDC187A0A096LP49 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.66■■□□□ 1.22
CCDC187A0A096LP49 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CCDC187A0A096LP49 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC187A0A096LP49 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
CCDC187A0A096LP49 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CCDC187A0A096LP49 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC187A0A096LP49 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC187A0A096LP49 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC187A0A096LP49 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CCDC187A0A096LP49 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.64■■□□□ 1.22
CCDC187A0A096LP49 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CCDC187A0A096LP49 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CCDC187A0A096LP49 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.64■■□□□ 1.21
CCDC187A0A096LP49 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.64■■□□□ 1.21
CCDC187A0A096LP49 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.64■■□□□ 1.21
CCDC187A0A096LP49 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.64■■□□□ 1.21
CCDC187A0A096LP49 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.64■■□□□ 1.21
CCDC187A0A096LP49 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.64■■□□□ 1.21
CCDC187A0A096LP49 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.64■■□□□ 1.21
CCDC187A0A096LP49 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC187A0A096LP49 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC187A0A096LP49 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
CCDC187A0A096LP49 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.63■■□□□ 1.21
CCDC187A0A096LP49 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC187A0A096LP49 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.63■■□□□ 1.21
CCDC187A0A096LP49 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.62■■□□□ 1.21
CCDC187A0A096LP49 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CCDC187A0A096LP49 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC187A0A096LP49 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC187A0A096LP49 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
CCDC187A0A096LP49 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.62■■□□□ 1.21
CCDC187A0A096LP49 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.62■■□□□ 1.21
CCDC187A0A096LP49 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.61■■□□□ 1.21
CCDC187A0A096LP49 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC187A0A096LP49 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.61■■□□□ 1.21
CCDC187A0A096LP49 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC187A0A096LP49 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC187A0A096LP49 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.61■■□□□ 1.21
CCDC187A0A096LP49 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
CCDC187A0A096LP49 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC187A0A096LP49 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC187A0A096LP49 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC187A0A096LP49 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.6■■□□□ 1.21
CCDC187A0A096LP49 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.6■■□□□ 1.21
CCDC187A0A096LP49 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms