Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 AC069224.1-201ENST00000566372 1715 ntBASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 AC112698.1-201ENST00000510299 916 ntBASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 WWOX-216ENST00000569818 525 ntBASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 MIR6786-201ENST00000616843 113 ntBASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 AL359183.1-201ENST00000623796 2132 ntBASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 AC010327.5-201ENST00000586923 3061 ntBASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAPPC1Q9Y5R8 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 AC013726.1-201ENST00000563747 2285 ntBASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms