Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 PCGF3-213ENST00000620529 1899 ntBASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 AL513480.1-201ENST00000451731 511 ntBASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 AC020765.3-201ENST00000613051 740 ntBASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA11Q9Y5H2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA11Q9Y5H2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA11Q9Y5H2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA11Q9Y5H2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA11Q9Y5H2 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA11Q9Y5H2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
PCDHGA11Q9Y5H2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA11Q9Y5H2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA11Q9Y5H2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA11Q9Y5H2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA11Q9Y5H2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA11Q9Y5H2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA11Q9Y5H2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA11Q9Y5H2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA11Q9Y5H2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 AC009078.2-202ENST00000463353 338 ntBASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 AC079776.4-201ENST00000511039 504 ntBASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 AL031432.2-201ENST00000566714 459 ntBASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 AL928711.1-201ENST00000570165 459 ntBASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA11Q9Y5H2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 AC005052.1-201ENST00000625181 2492 ntBASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 POU5F1P6-201ENST00000466990 990 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms