Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MACF1Q9UPN3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC6.56□□□□□ -1.36
MACF1Q9UPN3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
MACF1Q9UPN3 SOD2-202ENST00000367054 815 ntTSL 2 BASIC6.56□□□□□ -1.36
MACF1Q9UPN3 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MACF1Q9UPN3 HIST3H2BA-201ENST00000436555 524 ntBASIC6.56□□□□□ -1.36
MACF1Q9UPN3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
MACF1Q9UPN3 SLC25A15P1-201ENST00000456738 342 ntBASIC6.56□□□□□ -1.36
MACF1Q9UPN3 SLC25A15P3-201ENST00000505530 290 ntBASIC6.56□□□□□ -1.36
MACF1Q9UPN3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
MACF1Q9UPN3 LINC00431-202ENST00000636375 159 ntBASIC6.56□□□□□ -1.36
MACF1Q9UPN3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC6.56□□□□□ -1.36
MACF1Q9UPN3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 AL671710.1-201ENST00000610245 2349 ntBASIC6.55□□□□□ -1.36
MACF1Q9UPN3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 MIR4492-201ENST00000581627 80 ntBASIC6.55□□□□□ -1.36
MACF1Q9UPN3 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 PHF23-213ENST00000613632 850 ntTSL 5 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 AC131235.2-201ENST00000445553 1057 ntBASIC6.55□□□□□ -1.36
MACF1Q9UPN3 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 DERL2-206ENST00000572834 589 ntTSL 3 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 AC021097.1-201ENST00000607902 574 ntBASIC6.55□□□□□ -1.36
MACF1Q9UPN3 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 AC093909.3-201ENST00000504783 336 ntBASIC6.55□□□□□ -1.36
MACF1Q9UPN3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 RHOQP2-201ENST00000449922 579 ntBASIC6.55□□□□□ -1.36
MACF1Q9UPN3 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 AL138709.1-201ENST00000614840 1693 ntBASIC6.55□□□□□ -1.36
MACF1Q9UPN3 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 STK16-203ENST00000409516 895 ntTSL 2 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 MIR5001-201ENST00000580185 100 ntBASIC6.55□□□□□ -1.36
MACF1Q9UPN3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MACF1Q9UPN3 AL136982.4-201ENST00000437689 1740 ntBASIC6.54□□□□□ -1.36
MACF1Q9UPN3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 AC055811.3-201ENST00000584952 686 ntBASIC6.54□□□□□ -1.36
MACF1Q9UPN3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms