Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 BTNL10-201ENST00000595971 695 ntBASIC16.29■□□□□ 0.2
NCDNQ9UBB6 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.29■□□□□ 0.2
NCDNQ9UBB6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 MPDU1-223ENST00000582151 728 ntBASIC16.28■□□□□ 0.2
NCDNQ9UBB6 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCDNQ9UBB6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 AC018665.1-201ENST00000622927 1362 ntBASIC16.27■□□□□ 0.2
NCDNQ9UBB6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 FAM21FP-201ENST00000426241 1131 ntBASIC16.27■□□□□ 0.2
NCDNQ9UBB6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 PFN1P12-201ENST00000455938 534 ntBASIC16.27■□□□□ 0.2
NCDNQ9UBB6 AC098859.1-201ENST00000502915 1238 ntBASIC16.27■□□□□ 0.2
NCDNQ9UBB6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 SDHAP3-202ENST00000515467 728 ntBASIC16.27■□□□□ 0.2
NCDNQ9UBB6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 CYP2A7P1-201ENST00000595391 815 ntBASIC16.27■□□□□ 0.2
NCDNQ9UBB6 LINC01451-201ENST00000623792 534 ntBASIC16.27■□□□□ 0.2
NCDNQ9UBB6 AC004461.2-201ENST00000629517 803 ntBASIC16.27■□□□□ 0.2
NCDNQ9UBB6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCDNQ9UBB6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCDNQ9UBB6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.27■□□□□ 0.19
NCDNQ9UBB6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.27■□□□□ 0.19
NCDNQ9UBB6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.27■□□□□ 0.19
NCDNQ9UBB6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCDNQ9UBB6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.27■□□□□ 0.19
NCDNQ9UBB6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
NCDNQ9UBB6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCDNQ9UBB6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
NCDNQ9UBB6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
NCDNQ9UBB6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.27■□□□□ 0.19
NCDNQ9UBB6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms