Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 ME2P1-201ENST00000426028 1970 ntBASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 SNX33P1-201ENST00000592116 1762 ntBASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 AL512652.2-201ENST00000625156 1716 ntBASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 GGT3P-204ENST00000453783 1664 ntBASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 AC098831.1-202ENST00000438821 336 ntBASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 PRSS29P-201ENST00000440800 595 ntBASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 AC104692.2-201ENST00000603054 253 ntBASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 MIR7706-201ENST00000613747 67 ntBASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC68Q9H2F9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 AL031731.1-201ENST00000642131 2094 ntBASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms