Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 MIR770-201ENST00000390219 98 ntBASIC19.32■□□□□ 0.68
STAG1Q8WVM7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
STAG1Q8WVM7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.32■□□□□ 0.68
STAG1Q8WVM7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
STAG1Q8WVM7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
STAG1Q8WVM7 AC061975.2-201ENST00000581722 295 ntBASIC19.32■□□□□ 0.68
STAG1Q8WVM7 AC093512.1-201ENST00000617969 520 ntBASIC19.32■□□□□ 0.68
STAG1Q8WVM7 Z92544.3-201ENST00000624747 417 ntBASIC19.32■□□□□ 0.68
STAG1Q8WVM7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
STAG1Q8WVM7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
STAG1Q8WVM7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
STAG1Q8WVM7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
STAG1Q8WVM7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
STAG1Q8WVM7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
STAG1Q8WVM7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
STAG1Q8WVM7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
STAG1Q8WVM7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
STAG1Q8WVM7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 AL118508.1-201ENST00000613502 2345 ntBASIC19.31■□□□□ 0.68
STAG1Q8WVM7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.31■□□□□ 0.68
STAG1Q8WVM7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.31■□□□□ 0.68
STAG1Q8WVM7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 FAM86GP-201ENST00000448322 971 ntBASIC19.3■□□□□ 0.68
STAG1Q8WVM7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 AC069262.1-201ENST00000539058 672 ntBASIC19.3■□□□□ 0.68
STAG1Q8WVM7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
STAG1Q8WVM7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.29■□□□□ 0.68
STAG1Q8WVM7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms