Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 AC114341.1-201ENST00000618070 349 ntBASIC14.34□□□□□ -0.11
CCDC107Q8WV48 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC107Q8WV48 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC107Q8WV48 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCDC107Q8WV48 FRMD8P1-201ENST00000440433 1524 ntBASIC14.34□□□□□ -0.11
CCDC107Q8WV48 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC107Q8WV48 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC107Q8WV48 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC107Q8WV48 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC107Q8WV48 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CCDC107Q8WV48 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCDC107Q8WV48 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC107Q8WV48 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC107Q8WV48 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC107Q8WV48 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC107Q8WV48 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC107Q8WV48 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC107Q8WV48 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC107Q8WV48 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC107Q8WV48 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC107Q8WV48 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC107Q8WV48 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC107Q8WV48 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.33□□□□□ -0.11
CCDC107Q8WV48 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC107Q8WV48 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC107Q8WV48 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC107Q8WV48 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC107Q8WV48 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC107Q8WV48 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.33□□□□□ -0.11
CCDC107Q8WV48 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC107Q8WV48 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC107Q8WV48 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.33□□□□□ -0.12
CCDC107Q8WV48 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 POM121L3P-201ENST00000419331 1163 ntBASIC14.33□□□□□ -0.12
CCDC107Q8WV48 AL020989.1-201ENST00000422979 469 ntBASIC14.33□□□□□ -0.12
CCDC107Q8WV48 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 NPAP1P7-201ENST00000613027 823 ntBASIC14.33□□□□□ -0.12
CCDC107Q8WV48 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 AL645728.1-201ENST00000366221 2101 ntBASIC14.33□□□□□ -0.12
CCDC107Q8WV48 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.33□□□□□ -0.12
CCDC107Q8WV48 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC107Q8WV48 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 AC012615.1-201ENST00000565797 1299 ntBASIC14.32□□□□□ -0.12
CCDC107Q8WV48 MIR5100-201ENST00000579544 119 ntBASIC14.32□□□□□ -0.12
CCDC107Q8WV48 AC138894.3-201ENST00000603787 634 ntBASIC14.32□□□□□ -0.12
CCDC107Q8WV48 AL445228.2-201ENST00000605589 952 ntBASIC14.32□□□□□ -0.12
CCDC107Q8WV48 AC091076.1-201ENST00000610741 619 ntBASIC14.32□□□□□ -0.12
CCDC107Q8WV48 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 AC097637.2-201ENST00000624096 1997 ntBASIC14.32□□□□□ -0.12
CCDC107Q8WV48 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms